RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 PPP2R3AQ06190 1150 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 POU5F1BQ06416 359 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 KCNH2Q12809 1159 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 TFDP1Q14186 410 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 ZC2HC1CQ53FD0 456 aaPredicted RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 FBXO47Q5MNV8 452 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 ODR4Q5SWX8 454 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 MFSD5Q6N075 450 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 RRAGAQ7L523 313 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 CACNA2D4Q7Z3S7 1137 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 KIFC3Q9BVG8 833 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 HAUS4Q9H6D7 363 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 CEP72Q9P209 647 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 LARSQ9P2J5 1176 aaKnown RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 NR2E3Q9Y5X4 410 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 MRFAP1Q9Y605 127 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 V9GYY5 206 aaPredicted RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 LRRC53A6NM62 1247 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 CCDC169A6NNP5 214 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 NBNO60934 754 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 AKAP3O75969 853 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 IPO7O95373 1038 aaKnown RBP17.42■□□□□ 0.38
C9orf78-201ENST00000372447 DARSP14868 501 aaKnown RBP17.42■□□□□ 0.38
C9orf78-201ENST00000372447 EIF4BP23588 611 aaKnown RBP17.42■□□□□ 0.38
C9orf78-201ENST00000372447 PTENP60484 403 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
C9orf78-201ENST00000372447 PPP2R5AQ15172 486 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 NFIL3Q16649 462 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 PDXDC1Q6P996 788 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 ZNF662Q6ZS27 426 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 LRRN4CLQ8ND94 238 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 BADQ92934 168 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 CCDC42Q96M95 316 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 LSM14BQ9BX40 385 aaKnown RBP17.42■□□□□ 0.38
C9orf78-201ENST00000372447 MINDY3Q9H8M7 445 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 METTL14Q9HCE5 456 aaKnown RBP17.42■□□□□ 0.38
C9orf78-201ENST00000372447 ADGRA3Q8IWK6 1321 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 ZMYM2Q9UBW7 1377 aa17.42■□□□□ 0.38
C9orf78-201ENST00000372447 CLIC2O15247 247 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 NOL4O94818 638 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 GHRP10912 638 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 EPB41P11171 864 aaKnown RBP17.41■□□□□ 0.38
C9orf78-201ENST00000372447 CSF2RAP15509 400 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 LPIN1Q14693 890 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 SLC35F6Q8N357 371 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 MNS1Q8NEH6 495 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 SPIRE2Q8WWL2 714 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 VWCEQ96DN2 955 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 GCOM2Q9BZD3 368 aaPredicted RBP17.41■□□□□ 0.38
C9orf78-201ENST00000372447 NUCKS1Q9H1E3 243 aaKnown RBP17.41■□□□□ 0.38
C9orf78-201ENST00000372447 AGO3Q9H9G7 860 aaKnown RBP17.41■□□□□ 0.38
C9orf78-201ENST00000372447 ARHGAP20Q9P2F6 1191 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 NOC2LQ9Y3T9 749 aaKnown RBP17.41■□□□□ 0.38
C9orf78-201ENST00000372447 PCDHB13Q9Y5F0 798 aa17.41■□□□□ 0.38
C9orf78-201ENST00000372447 CTAGE9A4FU28 777 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 SLC16A4O15374 487 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 PHKA2P46019 1235 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 HSP90AA2PQ14568 343 aaPredicted RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 CDCA2Q69YH5 1023 aaPredicted RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 KIAA1328Q86T90 577 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 IFNLR1Q8IU57 520 aaPredicted RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 TMEM199Q8N511 208 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 CRACR2AQ9BSW2 395 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 CARD6Q9BX69 1037 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 NFKBIZQ9BYH8 718 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 KMT5AQ9NQR1 393 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 GUCA1BQ9UMX6 200 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 PARNO95453 639 aaKnown RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 AFPP02771 609 aaKnown RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 PLEKP08567 350 aaPredicted RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 FGFR4P22455 802 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 CASP4P49662 377 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 SMTNP53814 917 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 ELF2Q15723 593 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 CCDC122Q5T0U0 273 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 SRGAP1Q7Z6B7 1085 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 DEFB128Q7Z7B8 93 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 PDCL2Q8N4E4 241 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 DEPTORQ8TB45 409 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 SYN2Q92777 582 aaPredicted RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 STRA6Q9BX79 667 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 PDCL3Q9H2J4 239 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 ARHGAP28Q9P2N2 729 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 TRIM10Q9UDY6 481 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 KCNG1Q9UIX4 513 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 SQORQ9Y6N5 450 aa17.4■□□□□ 0.38
C9orf78-201ENST00000372447 TNRC18O15417 2968 aaPredicted RBP17.4■□□□□ 0.38
C9orf78-201ENST00000372447 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 RPS6KA5O75582 802 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 CD52P31358 61 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 MBTD1Q05BQ5 628 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 SPA17Q15506 151 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 TSHZ1Q6ZSZ6 1077 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 HS2ST1Q7LGA3 356 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 FAM228AQ86W67 206 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 USP38Q8NB14 1042 aa17.39■□□□□ 0.37
C9orf78-201ENST00000372447 TMEM161BQ8NDZ6 487 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms