RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SPDYE16A6NNV3 312 aaPredicted RBP31.1■■■□□ 2.57
SSBP3-204ENST00000371320 CYP1A2P05177 515 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 COPB2P35606 906 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 GNGT1P63211 74 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 CEP85LQ5SZL2 805 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 C1orf131Q8NDD1 294 aaKnown RBP31.1■■■□□ 2.57
SSBP3-204ENST00000371320 TRPM4Q8TD43 1214 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 DHX38Q92620 1227 aaKnown RBP31.1■■■□□ 2.57
SSBP3-204ENST00000371320 ELMO3Q96BJ8 720 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 ZNF653Q96CK0 615 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 NUP85Q9BW27 656 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 UAP1Q16222 522 aaPredicted RBP31.1■■■□□ 2.57
SSBP3-204ENST00000371320 ZNF564Q8TBZ8 553 aaPredicted RBP31.1■■■□□ 2.57
SSBP3-204ENST00000371320 MAF1Q9H063 256 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 WNT8AQ9H1J5 351 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 TRPC6Q9Y210 931 aa31.1■■■□□ 2.57
SSBP3-204ENST00000371320 WDR81Q562E7 1941 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 MARCKSL1P49006 195 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 LIG4P49917 911 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 POLGP54098 1239 aaPredicted RBP31.09■■■□□ 2.57
SSBP3-204ENST00000371320 SP2Q02086 613 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 AADACL2Q6P093 401 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 ENOSF1Q7L5Y1 443 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 CCDC125Q86Z20 511 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 KCNG1Q9UIX4 513 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 GTF3C4Q9UKN8 822 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 GOLGA6L10A6NI86 522 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 A6NNZ2 444 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 KRT5P13647 590 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 HSPA6P17066 643 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 FLT3P36888 993 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 MTMR3Q13615 1198 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 EMC2Q15006 297 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 STXBP2Q15833 593 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 TUBB8Q3ZCM7 444 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 DDX1Q92499 740 aaKnown RBP31.09■■■□□ 2.57
SSBP3-204ENST00000371320 ATP6V1G3Q96LB4 118 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 PI4K2AQ9BTU6 479 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 TRIM31Q9BZY9 425 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 GGA3Q9NZ52 723 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 AFG3L2Q9Y4W6 797 aa31.09■■■□□ 2.57
SSBP3-204ENST00000371320 ARID2Q68CP9 1835 aa31.08■■■□□ 2.57
SSBP3-204ENST00000371320 EXTL3O43909 919 aa31.08■■■□□ 2.57
SSBP3-204ENST00000371320 CTNNA1P35221 906 aaKnown RBP31.08■■■□□ 2.57
SSBP3-204ENST00000371320 PEX5P50542 639 aa31.08■■■□□ 2.57
SSBP3-204ENST00000371320 GCNT1Q02742 428 aa31.08■■■□□ 2.57
SSBP3-204ENST00000371320 CYFIP1Q7L576 1253 aa31.08■■■□□ 2.57
SSBP3-204ENST00000371320 KIAA1586Q9HCI6 787 aa31.08■■■□□ 2.57
SSBP3-204ENST00000371320 RSPH14Q9UHP6 348 aa31.08■■■□□ 2.57
SSBP3-204ENST00000371320 FAM187AA6NFU0 413 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 ZC3H11AO75152 810 aaKnown RBP eCLIP31.07■■■□□ 2.561e-8■□□□□ 9.1
SSBP3-204ENST00000371320 DHX34Q14147 1143 aaKnown RBP31.07■■■□□ 2.56
SSBP3-204ENST00000371320 ERP44Q9BS26 406 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 UVRAGQ9P2Y5 699 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 MYPNQ86TC9 1320 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 HMGB1P1B2RPK0 211 aaPredicted RBP31.07■■■□□ 2.56
SSBP3-204ENST00000371320 H0YGN5 161 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 EIF3HO15372 352 aaKnown RBP eCLIP31.07■■■□□ 2.56
SSBP3-204ENST00000371320 STRN3Q13033 797 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 SEL1L2Q5TEA6 688 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 TTC19Q6DKK2 380 aaPredicted RBP31.07■■■□□ 2.56
SSBP3-204ENST00000371320 ACAD10Q6JQN1 1059 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 KDM7AQ6ZMT4 941 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 UBLCP1Q8WVY7 318 aaPredicted RBP31.07■■■□□ 2.56
SSBP3-204ENST00000371320 ZNF302Q9NR11 478 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 NFS1Q9Y697 457 aa31.07■■■□□ 2.56
SSBP3-204ENST00000371320 DOCK5Q9H7D0 1870 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 SPOPO43791 374 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 NOL9Q5SY16 702 aaKnown RBP31.06■■■□□ 2.56
SSBP3-204ENST00000371320 TMC3Q7Z5M5 1100 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 GLG1Q92896 1179 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 CD101Q93033 1021 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 TMEM143Q96AN5 459 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 BTBD6Q96KE9 485 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 FAM81BQ96LP2 452 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 TMBIM4Q9HC24 238 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 C1orf112Q9NSG2 853 aa31.06■■■□□ 2.56
SSBP3-204ENST00000371320 ATP1A2P50993 1020 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 DUPD1Q68J44 220 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 ATP8B4Q8TF62 1192 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 ZNF516Q92618 1163 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.05■■■□□ 2.563e-6■■■□□ 18.1
SSBP3-204ENST00000371320 MAFBQ9Y5Q3 323 aaPredicted RBP31.05■■■□□ 2.56
SSBP3-204ENST00000371320 GRIN2DO15399 1336 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 PHF2O75151 1096 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 MYZAPP0CAP1 466 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 ATP4AP20648 1035 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 PRKG1Q13976 671 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 C15orf39Q6ZRI6 1047 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 DNERQ8NFT8 737 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 FAM84AQ96KN4 292 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 FNBP1Q96RU3 617 aa31.05■■■□□ 2.56
SSBP3-204ENST00000371320 GRIN3BO60391 1043 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 GGPS1O95749 300 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 OATP04181 439 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 NR1D1P20393 614 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 ICAM3P32942 547 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 DHX9Q08211 1270 aaKnown RBP31.04■■■□□ 2.56
SSBP3-204ENST00000371320 PSMD6Q15008 389 aa31.04■■■□□ 2.56
SSBP3-204ENST00000371320 CLEC16AQ2KHT3 1053 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms