RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 LRRC2Q9BYS8 371 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 AGXT2Q9BYV1 514 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 SPATC1LQ9H0A9 340 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 UPF3AQ9H1J1 476 aaKnown RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 AASDHPPTQ9NRN7 309 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 CEP131Q9UPN4 1083 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 TACC3Q9Y6A5 838 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 IGKV6D-41A0A0C4DH26 115 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 CCT8L1PA6NM43 557 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 PDE2AO00408 941 aaPredicted RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 KIAA0355O15063 1070 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 SART1O43290 800 aaKnown RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 PRC1O43663 620 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 HSF2BPO75031 334 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 CABYRO75952 493 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 FGFR1OPO95684 399 aaKnown RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 KRT16P08779 473 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 IDO1P14902 403 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 BDNFP23560 247 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 NOVP48745 357 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 NEK2P51955 445 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 MTTPP55157 894 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 ARPC4P59998 168 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 SULT2A1Q06520 285 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 CACNB2Q08289 660 aaPredicted RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 LSAMPQ13449 338 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 SLC44A4Q53GD3 710 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 KLHL10Q6JEL2 608 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 RUFY4Q6ZNE9 571 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 CAPN12Q6ZSI9 719 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 FAM160B2Q86V87 743 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 FMR1NBQ8N0W7 255 aaPredicted RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 KIF2BQ8N4N8 673 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 SLC17A8Q8NDX2 589 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 PRR7Q8TB68 274 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 NCSTNQ92542 709 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 ESR2Q92731 530 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 PTPRN2Q92932 1015 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 BRF1Q92994 677 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 BHMTQ93088 406 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 USP28Q96RU2 1077 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 SIKE1Q9BRV8 207 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 MKNK2Q9HBH9 465 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 TRIM10Q9UDY6 481 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 CIDEBQ9UHD4 219 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 SAP30BPQ9UHR5 308 aaKnown RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 DMGDHQ9UI17 866 aaKnown RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 PRELID1Q9Y255 219 aa4.81□□□□□ -1.64
CDR1-201ENST00000370532 TDRKHQ9Y2W6 561 aaKnown RBP4.81□□□□□ -1.64
CDR1-201ENST00000370532 WDR19Q8NEZ3 1342 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 KBTBD13C9JR72 458 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZNF185O15231 689 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 CBFA2T2O43439 604 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 RANBP6O60518 1105 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 JAK2O60674 1132 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PRDM1O75626 825 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ATP1A1P05023 1023 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 ITGA2BP08514 1039 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 CYP2D6P10635 497 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 VDRP11473 427 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 COL6A2P12110 1019 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 KCNA2P16389 499 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 TCF7P36402 384 aaPredicted RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 GEMIN4P57678 1058 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 NLRP12P59046 1061 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 COPS2P61201 443 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 NCALDP61601 193 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.8□□□□□ -1.64
CDR1-201ENST00000370532 C6orf183Q5T699 404 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZNF365Q70YC5 407 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 CYB5R4Q7L1T6 521 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 SESTD1Q86VW0 696 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZNF444Q8N0Y2 327 aaPredicted RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 CACTIN-AS1Q8N1I8 211 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.8□□□□□ -1.64
CDR1-201ENST00000370532 REPS2Q8NFH8 660 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 IGDCC4Q8TDY8 1250 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 SREK1Q8WXA9 508 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 LZICQ8WZA0 190 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 FAM136AQ96C01 138 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PAWRQ96IZ0 340 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 TMEM87BQ96K49 555 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 SPATA17Q96L03 361 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PANX2Q96RD6 677 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 SDF4Q9BRK5 362 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 RPAP3Q9H6T3 665 aaPredicted RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 RMND1Q9NWS8 449 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 FEM1BQ9UK73 627 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PPP1R9AQ9ULJ8 1098 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 STK38LQ9Y2H1 464 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZNF711Q9Y462 761 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 KIAA0100Q14667 2235 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 CFAP73A6NFT4 308 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 SRRM3A6NNA2 597 aaPredicted RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 PIK3CDO00329 1044 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 IFIT3O14879 490 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 ORC4O43929 436 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ASLP04424 464 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 FCER1AP12319 257 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms