RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 CBARPQ8N350 705 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 C9orf106Q8NAJ2 232 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 PLA2G15Q8NCC3 412 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 SIMC1Q8NDZ2 872 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 RSAD2Q8WXG1 361 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 SLC46A2Q9BY10 475 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 ANO3Q9BYT9 981 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 WNT8AQ9H1J5 351 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 TOPORSQ9NS56 1045 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 TYW1Q9NV66 732 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 SYBUQ9NX95 663 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 G3BP2Q9UN86 482 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 MYPNQ86TC9 1320 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 GOLGA8AA7E2F4 631 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 DAPK3O43293 454 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 JUNP05412 331 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 XPAP23025 273 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 IARSP41252 1262 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 NPEPPSP55786 919 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 SPIDRQ14159 915 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 MAN2A1Q16706 1144 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 ABCB5Q2M3G0 1257 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 APBB1IPQ7Z5R6 666 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 FAM98AQ8NCA5 519 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 OR5AN1Q8NGI8 311 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 AHCYL2Q96HN2 611 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 DYDC2Q96IM9 177 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 HIST1H2AHQ96KK5 128 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 ACAP3Q96P50 834 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 HIST1H2AJQ99878 128 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 NOL10Q9BSC4 688 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 LRFN3Q9BTN0 628 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 SLC29A3Q9BZD2 475 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 PUS7LQ9H0K6 701 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 KCNH6Q9H252 994 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 MTG2Q9H4K7 406 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 EPN1Q9Y6I3 576 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 NUMBLQ9Y6R0 609 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 TNKSO95271 1327 aa4.69□□□□□ -1.66
ECHDC1-201ENST00000368287 A0A0A6YYJ9 748 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 PCDH8O95206 1070 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 SEC24CP53992 1094 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 UGT8Q16880 541 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 INAVAQ3KP66 663 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 ODR4Q5SWX8 454 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 CLEC14AQ86T13 490 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 ARHGEF19Q8IW93 802 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 ZNF366Q8N895 744 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 NKD2Q969F2 451 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 COQ10AQ96MF6 247 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 WDR92Q96MX6 357 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 C14orf119Q9NWQ9 140 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 USP18Q9UMW8 372 aa4.68□□□□□ -1.66
ECHDC1-201ENST00000368287 PRSS38A1L453 326 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 DNAJC9-AS1A6NH13 148 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 TMEM200CA6NKL6 621 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 AHRRA9YTQ3 701 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 K7ESF4 209 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 FZD9O00144 591 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 ELL2O00472 640 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 NRP2O60462 931 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 OPHN1O60890 802 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 ALDH1L1O75891 902 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 PARNO95453 639 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 MT-CO1P00395 513 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 S100BP04271 92 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 HKR1P10072 659 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 SCAND1P57086 179 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 ANTXR2P58335 489 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 FAM189BP81408 668 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 FOXF2Q12947 444 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 TTF1Q15361 905 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 SYDE2Q5VT97 1194 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 UNQ6494/PRO21346Q6UXR6 183 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 SRRM1Q8IYB3 904 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 CMTM4Q8IZR5 234 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 CDYL2Q8N8U2 506 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 TGFBRAP1Q8WUH2 860 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 LINC00476Q8WZB0 136 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 PITHD1Q9GZP4 211 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 PRDM12Q9H4Q4 367 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 POLR3BQ9NW08 1133 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 WASHC2AQ641Q2 1341 aa4.67□□□□□ -1.66
ECHDC1-201ENST00000368287 STC2O76061 302 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 FSBPO95073 299 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 ONECUT2O95948 504 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 HMGB1P09429 215 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 CLEC2LP0C7M8 214 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 PLA2G5P39877 138 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 ABCG1P45844 678 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 GPR15P49685 360 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 MANFP55145 182 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 NRG3P56975 720 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 MCL1Q07820 350 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 FOXI1Q12951 378 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 GPR162Q16538 588 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 FSCN1Q16658 493 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 CCDC178Q5BJE1 867 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 ZBTB41Q5SVQ8 909 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms