RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 PSMA7O14818 248 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 CALUO43852 315 aaPredicted RBP13.73□□□□□ -0.21
CNTF-201ENST00000361987 OFD1O75665 1012 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 CLTAP09496 248 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 MYOGP15173 224 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 MLH1P40692 756 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 TNFSF9P41273 254 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 CYP2J2P51589 502 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 COBLL1Q53SF7 1204 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 SASS6Q6UVJ0 657 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
CNTF-201ENST00000361987 ZSWIM2Q8NEG5 633 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 FAM213AQ9BRX8 229 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 SEMA6BQ9H3T3 888 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 HSPBP1Q9NZL4 362 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 CGNQ9P2M7 1197 aaKnown RBP13.73□□□□□ -0.21
CNTF-201ENST00000361987 GIT1Q9Y2X7 761 aa13.73□□□□□ -0.21
CNTF-201ENST00000361987 LDHAP00338 332 aaKnown RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 PBX2P40425 430 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 PPP1R2P41236 205 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 BTG3Q14201 252 aaPredicted RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 KYAT1Q16773 422 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 MLKLQ8NB16 471 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 RDH13Q8NBN7 331 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 ZNF689Q96CS4 500 aaPredicted RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 DHTKD1Q96HY7 919 aaPredicted RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 CASD1Q96PB1 797 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 TMEM117Q9H0C3 514 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 RPF1Q9H9Y2 349 aaKnown RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 TOPORSQ9NS56 1045 aaPredicted RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 TRAF3IP3Q9Y228 551 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 EXTL3O43909 919 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 FAM189A1O60320 539 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 POMCP01189 267 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 CXCL8P10145 99 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 NLRP12P59046 1061 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 HTRA4P83105 476 aaPredicted RBP13.72□□□□□ -0.21
CNTF-201ENST00000361987 DPCR1Q3MIW9 517 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 GPD1LQ8N335 351 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 NELFBQ8WX92 580 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 EEF2KMTQ96G04 330 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 TSG101Q99816 390 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
CNTF-201ENST00000361987 LCHNA4D1U4 455 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 TRIM49BA6NDI0 452 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 KIAA0391O15091 583 aaKnown RBP13.71□□□□□ -0.21
CNTF-201ENST00000361987 EXOC3O60645 756 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 NR3C1P04150 777 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
CNTF-201ENST00000361987 STX17P56962 302 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 RNASELQ05823 741 aaKnown RBP13.71□□□□□ -0.21
CNTF-201ENST00000361987 SLC10A6Q3KNW5 377 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 ANKRD40Q6AI12 368 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 CENPPQ6IPU0 288 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 CRELD2Q6UXH1 353 aaPredicted RBP13.71□□□□□ -0.21
CNTF-201ENST00000361987 XXYLT1Q8NBI6 393 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 P2RX5Q93086 422 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 CXCL16Q9H2A7 254 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 CPSF3Q9UKF6 684 aaKnown RBP13.71□□□□□ -0.21
CNTF-201ENST00000361987 CTNND2Q9UQB3 1225 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 PCDHA11Q9Y5I1 949 aa13.71□□□□□ -0.21
CNTF-201ENST00000361987 LETM1O95202 739 aaPredicted RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 CA3P07451 260 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 NR2F2P24468 414 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 CCNE1P24864 410 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 RPL13P26373 211 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 SCNN1GP51170 649 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 PAK1Q13153 545 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 ADAM9Q13443 819 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 RAB30Q15771 203 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 ENOX2Q16206 610 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 GLRA4Q5JXX5 417 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 SPOUT1Q5T280 376 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 CEP135Q66GS9 1140 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 C12orf56Q8IXR9 622 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 GSTCDQ8NEC7 633 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 KIAA1586Q9HCI6 787 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 MIOSQ9NXC5 875 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 KANSL3Q9P2N6 904 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 YBX2Q9Y2T7 364 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 PTPRSQ13332 1948 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 BICDL2A1A5D9 508 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 SYCE3A1L190 88 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 ZNF233A6NK53 670 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 LACTBL1A8MY62 500 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 SMAD3P84022 425 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 LRRC63Q05C16 580 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 SPAG1Q07617 926 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 SNRNP35Q16560 246 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms