RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MFAP3P55082 362 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 PRPF4BQ13523 1007 aaKnown RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 NOP9Q86U38 636 aaKnown RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 PROCA1Q8NCQ7 364 aaPredicted RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 C1orf131Q8NDD1 294 aaKnown RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 ASAP3Q8TDY4 903 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 IFT81Q8WYA0 676 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 PIK3R5Q8WYR1 880 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 SHC3Q92529 594 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 FAM84AQ96KN4 292 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 CEP89Q96ST8 783 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 PCYT2Q99447 389 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 PORCNQ9H237 461 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 COG5Q9UP83 839 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 H0YCG3 227 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 RAD51CO43502 376 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 CFAP58Q5T655 872 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 EMC10Q5UCC4 262 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 SLC47A2Q86VL8 602 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 CALR3Q96L12 384 aaKnown RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 FHDC1Q9C0D6 1143 aaPredicted RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 ASCC2Q9H1I8 757 aaPredicted RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 ISCUQ9H1K1 167 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 NOCTQ9UK39 431 aaKnown RBP24.35■■□□□ 1.49
LDB1-201ENST00000361198 AMFRQ9UKV5 643 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 FTLP02792 175 aaPredicted RBP24.34■■□□□ 1.49
LDB1-201ENST00000361198 CHRNB2P17787 502 aa24.34■■□□□ 1.49
LDB1-201ENST00000361198 GLRA2P23416 452 aa24.34■■□□□ 1.49
LDB1-201ENST00000361198 LIG4P49917 911 aa24.34■■□□□ 1.49
LDB1-201ENST00000361198 EEPD1Q7L9B9 569 aa24.34■■□□□ 1.49
LDB1-201ENST00000361198 USP37Q86T82 979 aa24.34■■□□□ 1.49
LDB1-201ENST00000361198 PCDHB18PQ96TA0 734 aa24.34■■□□□ 1.49
LDB1-201ENST00000361198 ZNF233A6NK53 670 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 GTF2H1P32780 548 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 NIFKQ9BYG3 293 aaKnown RBP24.33■■□□□ 1.49
LDB1-201ENST00000361198 BHMG1C9JSJ3 638 aaPredicted RBP24.33■■□□□ 1.49
LDB1-201ENST00000361198 CNMDO75829 334 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 KRT14P02533 472 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 MAGEA9P43362 315 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 KLHL7Q8IXQ5 586 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 SLC7A3Q8WY07 619 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 NT5C1BQ96P26 610 aa24.33■■□□□ 1.49
LDB1-201ENST00000361198 NOC2LQ9Y3T9 749 aaKnown RBP24.33■■□□□ 1.49
LDB1-201ENST00000361198 PGRMC1O00264 195 aaKnown RBP24.32■■□□□ 1.48
LDB1-201ENST00000361198 ARL2P36404 184 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 ERO1BQ86YB8 467 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 TATDN2Q93075 761 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.32■■□□□ 1.483e-9■■□□□ 11.4
LDB1-201ENST00000361198 TAF1DQ9H5J8 278 aaPredicted RBP24.32■■□□□ 1.48
LDB1-201ENST00000361198 KCNG1Q9UIX4 513 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 LRRIQ4A6NIV6 560 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 ABCD1P33897 745 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 GNGT1P63211 74 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 STRN3Q13033 797 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 RASGEF1CQ8N431 466 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 ZNF516Q92618 1163 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 PI4K2AQ9BTU6 479 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 AP1M1Q9BXS5 423 aa24.32■■□□□ 1.48
LDB1-201ENST00000361198 EXTL3O43909 919 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 HSPA9P38646 679 aaKnown RBP24.31■■□□□ 1.48
LDB1-201ENST00000361198 NAMPTP43490 491 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 TRADDQ15628 312 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 RHOT2Q8IXI1 618 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 DHX38Q92620 1227 aaKnown RBP24.31■■□□□ 1.48
LDB1-201ENST00000361198 HAPLN2Q9GZV7 340 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 RTN2O75298 545 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 MMEP08473 750 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 WNT7BP56706 349 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 NLRP11P59045 1033 aaKnown RBP24.31■■□□□ 1.48
LDB1-201ENST00000361198 NEDD9Q14511 834 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 LY6KQ17RY6 165 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 LMBRD2Q68DH5 695 aaPredicted RBP24.31■■□□□ 1.48
LDB1-201ENST00000361198 ANKRD13AQ8IZ07 590 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 SPON1Q9HCB6 807 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 TXNRD2Q9NNW7 524 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 STYXL1Q9Y6J8 313 aa24.31■■□□□ 1.48
LDB1-201ENST00000361198 K7ERI5 159 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 DDX3YO15523 660 aaKnown RBP24.3■■□□□ 1.48
LDB1-201ENST00000361198 GGPS1O95749 300 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 PGK2P07205 417 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 CYP11B1P15538 503 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 ACOT2P49753 483 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 STAT5BP51692 787 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 FMO1Q01740 532 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 TARBP2Q15633 366 aaKnown RBP24.3■■□□□ 1.48
LDB1-201ENST00000361198 C15orf39Q6ZRI6 1047 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 DEPTORQ8TB45 409 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 BCAS4Q8TDM0 211 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 PSPC1Q8WXF1 523 aaKnown RBP24.3■■□□□ 1.48
LDB1-201ENST00000361198 UPF1Q92900 1129 aaKnown RBP eCLIP24.3■■□□□ 1.488e-17■■■■□ 22.5
LDB1-201ENST00000361198 ZBTB45Q96K62 511 aaPredicted RBP24.3■■□□□ 1.48
LDB1-201ENST00000361198 SPDYE5A6NIY4 337 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 CXCL11O14625 94 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 ECHS1P30084 290 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 TCF7P36402 384 aaPredicted RBP24.3■■□□□ 1.48
LDB1-201ENST00000361198 GUCY2FP51841 1108 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 ERVK-9P63128 1117 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 ENPEPQ07075 957 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 CUL1Q13616 776 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 KCNN1Q92952 543 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms