RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ANKMY2Q8IV38 441 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 PBXIP1Q96AQ6 731 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 ZIM3Q96PE6 472 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 CHCHD3Q9NX63 227 aaKnown RBP15.69■□□□□ 0.1
CHD4-201ENST00000357008 ZFATQ9P243 1243 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 KIF17Q9P2E2 1029 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 SLC8A2Q9UPR5 921 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 ZNF711Q9Y462 761 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 EIF3EP60228 445 aaKnown RBP15.69■□□□□ 0.1
CHD4-201ENST00000357008 NAB2Q15742 525 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 LONRF1Q17RB8 773 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 ZHX2Q9Y6X8 837 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 hCG_2014768A0A024R1R8 64 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 SNAP23O00161 211 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 CORO7P57737 925 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 FOXD4Q12950 439 aaPredicted RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 PWP2Q15269 919 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 HAUS6Q7Z4H7 955 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 NSUN6Q8TEA1 469 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 TEX12Q9BXU0 123 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 APEX2Q9UBZ4 518 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 TRIM10Q9UDY6 481 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 TMEM94Q12767 1356 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 ACTR2P61160 394 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 NOP9Q86U38 636 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 SRBD1Q8N5C6 995 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 THAP11Q96EK4 314 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 DHX35Q9H5Z1 703 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 EML4Q9HC35 981 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 NPHS2Q9NP85 383 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 HACD3Q9P035 362 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 PSMC3IPQ9P2W1 217 aaPredicted RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 SUFUQ9UMX1 484 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 MROH7-TTC4A0A0A0MT08 1334 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 CCT8L1PA6NM43 557 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 CRKP46108 304 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 CYTH1Q15438 398 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 NEDD1Q8NHV4 660 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 RBAKQ9NYW8 714 aaPredicted RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 A0A1W2PQJ5 194 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 APOA1P02647 267 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 UCHL3P15374 230 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 DAB2P98082 770 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 EPHA7Q15375 998 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 C1orf228Q6PIY5 440 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 ERP27Q96DN0 273 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 ACAP3Q96P50 834 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 FBXO40Q9UH90 709 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 DBR1Q9UK59 544 aaKnown RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 SAMD9LQ8IVG5 1584 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 MYO5CQ9NQX4 1742 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 APOL1O14791 398 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 THEM5Q8N1Q8 247 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 GPR101Q96P66 508 aaPredicted RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 KCNK16Q96T55 309 aa15.68■□□□□ 0.1
CHD4-201ENST00000357008 FAM49AQ9H0Q0 323 aaPredicted RBP15.68■□□□□ 0.1
CHD4-201ENST00000357008 RAD51CO43502 376 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 HADHAP40939 763 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 P3H1Q32P28 736 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 MRPL4Q9BYD3 311 aaKnown RBP15.67■□□□□ 0.1
CHD4-201ENST00000357008 ISCUQ9H1K1 167 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 TUFT1Q9NNX1 390 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 GOLGA8RI6L899 631 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 SERPINB10P48595 397 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 INPP5AQ14642 412 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 DNAJC9Q8WXX5 260 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 KIF1BO60333 1816 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 TMCC1O94876 653 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 KCNA3P22001 575 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 PRAMEP78395 509 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 ZNF302Q9NR11 478 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 PKD2L2Q9NZM6 624 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 GABBR1Q9UBS5 961 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 SRP68Q9UHB9 627 aaKnown RBP15.67■□□□□ 0.1
CHD4-201ENST00000357008 LAMC1P11047 1609 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 STX3Q13277 289 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 SLC10A5Q5PT55 438 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 RMDN2Q96LZ7 410 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 GYPCP04921 128 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 TRADDQ15628 312 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 OR2W6PQ8NHA6 318 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 POLR3FQ9H1D9 316 aaPredicted RBP15.67■□□□□ 0.1
CHD4-201ENST00000357008 CD209Q9NNX6 404 aa15.67■□□□□ 0.1
CHD4-201ENST00000357008 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
CHD4-201ENST00000357008 CYP27B1O15528 508 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 PTGISQ16647 500 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 JAMLQ86YT9 394 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 NOA1Q8NC60 698 aaKnown RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 GTPBP10A4D1E9 387 aaKnown RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 CARSP49589 748 aaKnown RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 DUOXA2Q1HG44 320 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 ARHGAP27Q6ZUM4 889 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 ZNF335Q9H4Z2 1342 aaPredicted RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 KCNA1Q09470 495 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 TMEM154Q6P9G4 183 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms