RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PSMD6Q15008 389 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 TRIM71Q2Q1W2 868 aaKnown RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 CATSPER4Q7RTX7 472 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 CEP120Q8N960 986 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 ZNF333Q96JL9 665 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 TOPORSQ9NS56 1045 aaPredicted RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 FAM207AQ9NSI2 230 aaPredicted RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 A0A0U1RQG5 324 aaPredicted RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 GTPBP10A4D1E9 387 aaKnown RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 NOL4O94818 638 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 SLC9A1P19634 815 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 GCLMP48507 274 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 MGAT3Q09327 533 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 PTK7Q13308 1070 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 RSPH3Q86UC2 560 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 LSM14BQ9BX40 385 aaKnown RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 SENP6Q9GZR1 1112 aaPredicted RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 TRPV6Q9H1D0 765 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 RBAKQ9NYW8 714 aaPredicted RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 CPSF3Q9UKF6 684 aaKnown RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 CAPN11Q9UMQ6 739 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 TRPV2Q9Y5S1 764 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 A0A1W2PQJ5 194 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 CTSHP09668 335 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 MCF2P10911 925 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 PON1P27169 355 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 KCNJ6P48051 423 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 CTCFP49711 727 aaPredicted RBP19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 CLDN10P78369 228 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 MYL7Q01449 175 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 PCBP1Q15365 356 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 GBP6Q6ZN66 633 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 TMEM139Q8IV31 216 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 BRSK2Q8IWQ3 736 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 TMEM192Q8IY95 271 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 THNSL1Q8IYQ7 743 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 FAM84AQ96KN4 292 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 TMEM117Q9H0C3 514 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 PDE11AQ9HCR9 933 aa19.7■□□□□ 0.74
SMARCD3-202ENST00000356800 ARVCFO00192 962 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 STX10O60499 249 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 B4GALT4O60513 344 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 DLATP10515 647 aaKnown RBP19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 ACTN1P12814 892 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 TRIM21P19474 475 aaKnown RBP19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 FECHP22830 423 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 THPOP40225 353 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 HSP90AA2PQ14568 343 aaPredicted RBP19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 EXOC3L4Q17RC7 722 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 ZNF516Q92618 1163 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 ARMC5Q96C12 935 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 SIX2Q9NPC8 291 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 AGPAT5Q9NUQ2 364 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 GCNT4Q9P109 453 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 NOC2LQ9Y3T9 749 aaKnown RBP19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 PTPRJQ12913 1337 aa19.69■□□□□ 0.74
SMARCD3-202ENST00000356800 M0QZ92 97 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 RPLP2P05387 115 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 MNX1P50219 401 aaPredicted RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 CDK7P50613 346 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 ENOX2Q16206 610 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 FAM228AQ86W67 206 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 NEK11Q8NG66 645 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 BAG1Q99933 345 aaPredicted RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 NAA15Q9BXJ9 866 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 OSBPL7Q9BZF2 842 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 CRISPLD2Q9H0B8 497 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 GANQ9H2C0 597 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 RRAGDQ9NQL2 400 aaPredicted RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 ABHD10Q9NUJ1 306 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 NOD1Q9Y239 953 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 LUC7L2Q9Y383 392 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 CITO14578 2027 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 TULP1O00294 542 aaPredicted RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 PMM2O15305 246 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 MEFVO15553 781 aaPredicted RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 KRT9P35527 623 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 OSTNP61366 133 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 LMBRD2Q68DH5 695 aaPredicted RBP19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 LMO3Q8TAP4 145 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 EDEM3Q9BZQ6 932 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 TMEM8AQ9HCN3 771 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 PLCB1Q9NQ66 1216 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 TRIP11Q15643 1979 aa19.68■□□□□ 0.74
SMARCD3-202ENST00000356800 P4HA2O15460 535 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 ARHGAP6O43182 974 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 N4BP1O75113 896 aaKnown RBP19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 LRRN2O75325 713 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 GTF2H1P32780 548 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 MXI1P50539 228 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 PKN2Q16513 984 aaKnown RBP19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 EPC2Q52LR7 807 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 NOTUMQ6P988 496 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 TRIM65Q6PJ69 517 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 C15orf39Q6ZRI6 1047 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 USP37Q86T82 979 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 DNAJC7Q99615 494 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 EIF2AQ9BY44 585 aaKnown RBP19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 KCND1Q9NSA2 647 aa19.67■□□□□ 0.74
SMARCD3-202ENST00000356800 STAG3L1P0CL83 205 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms