RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ANPEPP15144 967 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 INAQ16352 499 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 FAM83BQ5T0W9 1011 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 HES6Q96HZ4 224 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 NRDE2Q9H7Z3 1164 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 DNAJB4Q9UDY4 337 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 ARMCX3Q9UH62 379 aaPredicted RBP16.76■□□□□ 0.27
RTN3-205ENST00000356000 LAMB4A4D0S4 1761 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 SH3PXD2BA1X283 911 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 AP1G1O43747 822 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 CAMK2BQ13554 666 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 THOC5Q13769 683 aaKnown RBP16.76■□□□□ 0.27
RTN3-205ENST00000356000 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
RTN3-205ENST00000356000 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 RTCBQ9Y3I0 505 aaKnown RBP16.76■□□□□ 0.27
RTN3-205ENST00000356000 SLC4A4Q9Y6R1 1079 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 EP400Q96L91 3159 aa16.76■□□□□ 0.27
RTN3-205ENST00000356000 DOT1LQ8TEK3 1739 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 F8W8V4 182 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 FBP2O00757 339 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 NOL4O94818 638 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 STK4Q13043 487 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 MAPK7Q13164 816 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 MED21Q13503 144 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 CLNKQ7Z7G1 428 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 NT5DC3Q86UY8 548 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 PIP4K2CQ8TBX8 421 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 RBM38Q9H0Z9 239 aaKnown RBP16.75■□□□□ 0.27
RTN3-205ENST00000356000 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 HBS1LQ9Y450 684 aaKnown RBP16.75■□□□□ 0.27
RTN3-205ENST00000356000 RPL5P46777 297 aaKnown RBP16.75■□□□□ 0.27
RTN3-205ENST00000356000 COBLL1Q53SF7 1204 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 ARL6IP4Q66PJ3 421 aaKnown RBP16.75■□□□□ 0.27
RTN3-205ENST00000356000 PHLDB2Q86SQ0 1253 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 FAM186BQ8IYM0 893 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 PLEKHO2Q8TD55 490 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 CASP10Q92851 521 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 MCUR1Q96AQ8 359 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 ITPKCQ96DU7 683 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 PTCD3Q96EY7 689 aaKnown RBP16.75■□□□□ 0.27
RTN3-205ENST00000356000 TUBB6Q9BUF5 446 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 SEMA6BQ9H3T3 888 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 UBAP1Q9NZ09 502 aa16.75■□□□□ 0.27
RTN3-205ENST00000356000 C2CD2LO14523 706 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 GYG2O15488 501 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 PLCG2P16885 1265 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 RPL21P46778 160 aaKnown RBP16.74■□□□□ 0.27
RTN3-205ENST00000356000 ARPC4P59998 168 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 PFKPQ01813 784 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 PDE4DQ08499 809 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 KLHL30Q0D2K2 578 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 RRP1BQ14684 758 aaKnown RBP16.74■□□□□ 0.27
RTN3-205ENST00000356000 CENPPQ6IPU0 288 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 RGS9BPQ6ZS82 235 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 TRMT10CQ7L0Y3 403 aaKnown RBP16.74■□□□□ 0.27
RTN3-205ENST00000356000 SYT2Q8N9I0 419 aaPredicted RBP16.74■□□□□ 0.27
RTN3-205ENST00000356000 CLIP3Q96DZ5 547 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 VPS50Q96JG6 964 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 METTL22Q9BUU2 404 aaPredicted RBP16.74■□□□□ 0.27
RTN3-205ENST00000356000 TUT1Q9H6E5 874 aaKnown RBP16.74■□□□□ 0.27
RTN3-205ENST00000356000 ZNHIT2Q9UHR6 403 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 STX8Q9UNK0 236 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 FOXO6A8MYZ6 492 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 S100A1P23297 94 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 CCR3P51677 355 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 HSP90AA5PQ58FG0 334 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 SYCP2LQ5T4T6 812 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 RIN3Q8TB24 985 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 ATP6V0A1Q93050 837 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 MYD88Q99836 296 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 ERVK-5Q9HDB9 667 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 EURLQ9NYK6 297 aa16.74■□□□□ 0.27
RTN3-205ENST00000356000 ADCY3O60266 1144 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 EDF1O60869 148 aaKnown RBP16.73■□□□□ 0.27
RTN3-205ENST00000356000 GAS8O95995 478 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 SMIM18P0DKX4 95 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 AMPD1P23109 780 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 PTGIRP43119 386 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 RCAN1P53805 252 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 WDR4P57081 412 aaKnown RBP16.73■□□□□ 0.27
RTN3-205ENST00000356000 ASPHQ12797 758 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 LPIN1Q14693 890 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 NLRP9Q7RTR0 991 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 SFR1Q86XK3 245 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 SYCE1Q8N0S2 351 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 VPS52Q8N1B4 723 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 FANCBQ8NB91 859 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 C7orf43Q8WVR3 580 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 ZMAT2Q96NC0 199 aaKnown RBP16.73■□□□□ 0.27
RTN3-205ENST00000356000 NDE1Q9NXR1 346 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
RTN3-205ENST00000356000 TSC22D4Q9Y3Q8 395 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 NDC80O14777 642 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 BUD23O43709 281 aaKnown RBP16.73■□□□□ 0.27
RTN3-205ENST00000356000 TRAPPC10P48553 1259 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms