RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 NFS1Q9Y697 457 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 DCAF8L1A6NGE4 600 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 MANSC4A6NHS7 340 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 ZBTB42B2RXF5 422 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 SART1O43290 800 aaKnown RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 STRNO43815 780 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 CEP104O60308 925 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 KIAA0754O94854 1291 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 NR2F2P24468 414 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 MARK3P27448 753 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 PEX3P56589 373 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 MIS18BP1Q6P0N0 1132 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 PLEKHH3Q7Z736 793 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 SPATS2Q86XZ4 545 aaKnown RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 FAM178BQ8IXR5 827 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 ACTRT1Q8TDG2 376 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 GTF3C2Q8WUA4 911 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 ARHGAP39Q9C0H5 1083 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 CENPHQ9H3R5 247 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 CYP26B1Q9NR63 512 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 KCND2Q9NZV8 630 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 TCEAL9Q9UHQ7 104 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 NAGPAQ9UK23 515 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 TRAF3IP3Q9Y228 551 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 CETN3O15182 167 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 SLC16A4O15374 487 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 AOC2O75106 756 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 AKAP3O75969 853 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 FSBPO95073 299 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 FAM107AO95990 144 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 FLT3P36888 993 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 ARHGAP1Q07960 439 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 EDRF1Q3B7T1 1238 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 MORN1Q5T089 497 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 FAM102BQ5T8I3 360 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 YTHDF3Q7Z739 585 aaKnown RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 DPP9Q86TI2 863 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 ABRAQ8N0Z2 381 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 METTL13Q8N6R0 699 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 EIF1ADQ8N9N8 165 aaKnown RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 PPP1R13LQ8WUF5 828 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 LENG1Q96BZ8 264 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 SPAG5Q96R06 1193 aa9.28□□□□□ -0.92
TRIM55-204ENST00000353317 DDX47Q9H0S4 455 aaKnown RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 PPANQ9NQ55 473 aaKnown RBP9.28□□□□□ -0.92
TRIM55-204ENST00000353317 GOLGA6L10A6NI86 522 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 E7EVH7 732 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 MYZAPP0CAP1 466 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 GAP43P17677 238 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 STAT5BP51692 787 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 ZNF844Q08AG5 666 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 CUL1Q13616 776 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 NEDD9Q14511 834 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 TARBP2Q15633 366 aaKnown RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 C10orf76Q5T2E6 689 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 TRAPPC12Q8WVT3 735 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 SEPT1Q8WYJ6 367 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 ATP6V0A1Q93050 837 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 TMEM143Q96AN5 459 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 PBKQ96KB5 322 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 SPATA33Q96N06 139 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 GJD2Q9UKL4 321 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 NOC2LQ9Y3T9 749 aaKnown RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 IVNS1ABPQ9Y6Y0 642 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 TRIP12Q14669 1992 aaPredicted RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 ASB14A6NK59 587 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 PGRMC1O00264 195 aaKnown RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 OATP04181 439 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 ITGA4P13612 1032 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 PLS3P13797 630 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 SMPD1P17405 629 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 PON1P27169 355 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 CTNNA1P35221 906 aaKnown RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 NPTX2P47972 431 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 MNAT1P51948 309 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 MKRN4PQ13434 485 aaPredicted RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 XKR3Q5GH77 459 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 LRIG3Q6UXM1 1119 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 PPP4R3CPQ6ZMV5 832 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 DHX37Q8IY37 1157 aaKnown RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 TPCN2Q8NHX9 752 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 USP6NLQ92738 828 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 RNPEPQ9H4A4 650 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 YY1AP1Q9H869 796 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 ARMCX3Q9UH62 379 aaPredicted RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 AMACRQ9UHK6 382 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 SLC12A6Q9UHW9 1150 aa9.27□□□□□ -0.93
TRIM55-204ENST00000353317 AJAP1Q9UKB5 411 aaPredicted RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 DIS3Q9Y2L1 958 aaKnown RBP9.27□□□□□ -0.93
TRIM55-204ENST00000353317 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 H0YHG0 523 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 K7ENM7 598 aa9.26□□□□□ -0.93
TRIM55-204ENST00000353317 PDXKO00764 312 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms