RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 AK8Q96MA6 479 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 MID2Q9UJV3 735 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 ENDOD1O94919 500 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 GCFC2P16383 781 aaKnown RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 GPS1Q13098 491 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 SMARCAD1Q9H4L7 1026 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 MAD2L2Q9UI95 211 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 ZNF229Q9UJW7 825 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 C16orf72Q14CZ0 275 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 RNF180Q86T96 592 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 GSPT2Q8IYD1 628 aaKnown RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 PABPC5Q96DU9 382 aaKnown RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 LZTS1Q9Y250 596 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 SUPT3HO75486 399 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 GFAPP14136 432 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 HMOX2P30519 316 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 TRPC1P48995 793 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 RWDD2BP57060 319 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 ALDH6A1Q02252 535 aaKnown RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 GFPT1Q06210 699 aaPredicted RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 ARHGEF7Q14155 803 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 NUDT12Q9BQG2 462 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 MRPL4Q9BYD3 311 aaKnown RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 MRFAP1Q9Y605 127 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 ZNF197O14709 1029 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 PALMO75781 387 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 SDC4P31431 198 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 NFU1Q9UMS0 254 aa12.94□□□□□ -0.34
TRIOBP-202ENST00000344404 DARSP14868 501 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 NUGGCQ68CJ6 796 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PID1Q7Z2X4 250 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ANKMY2Q8IV38 441 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 SYT2Q8N9I0 419 aaPredicted RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ELAC2Q9BQ52 826 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 LSM7Q9UK45 103 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 CAB39Q9Y376 341 aaPredicted RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 TRIM17Q9Y577 477 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 WDR47O94967 919 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 HNRNPCP07910 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ALDH7A1P49419 539 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PHKG1Q16816 387 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PAGE5Q96GU1 130 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 CPDO75976 1380 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 GOLGA8RI6L899 631 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 KRT4P19013 534 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 C1orf146Q5VVC0 180 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 MYOZ2Q9NPC6 264 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 SPATS2LQ9NUQ6 558 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 RBAKQ9NYW8 714 aaPredicted RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 HSPBP1Q9NZL4 362 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 MCM8Q9UJA3 840 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 GYG2O15488 501 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 BCAR1P56945 870 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 KRT77Q7Z794 578 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 BTBD6Q96KE9 485 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PAPOLBQ9NRJ5 636 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ABI2Q9NYB9 513 aaPredicted RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PRG3Q9Y2Y8 225 aaPredicted RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 SNX24Q9Y343 169 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 MRPL42Q9Y6G3 142 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 V9GYQ6 96 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 CYTH3O43739 400 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PDAP1Q13442 181 aaKnown RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 MTM1Q13496 603 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 LRRC71Q8N4P6 559 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PPP1R13LQ8WUF5 828 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 PNKPQ96T60 521 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 NDE1Q9NXR1 346 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 MAPK13O15264 365 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 CYP21A2P08686 494 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 MZF1P28698 734 aaPredicted RBP12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 BTKQ06187 659 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 FGD2Q7Z6J4 655 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 ZNF614Q8N883 585 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 DCAF4Q8WV16 495 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 INPP5DQ92835 1189 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 FAM81BQ96LP2 452 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
TRIOBP-202ENST00000344404 F5H6K3 240 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 KLRC3Q07444 240 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 C16orf62Q7Z3J2 963 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 GPT2Q8TD30 523 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 FOPNLQ96NB1 174 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 PKP3Q9Y446 797 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 RASA4BC9J798 803 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 RASA4O43374 803 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 ROR1Q01973 937 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 RALGDSQ12967 914 aa12.92□□□□□ -0.34
TRIOBP-202ENST00000344404 ST13P4Q8IZP2 240 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms