RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TAS1R3Q7RTX0 852 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 JAMLQ86YT9 394 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 GPD1LQ8N335 351 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 RDM1Q8NG50 284 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 SPIRE2Q8WWL2 714 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 MAGOHBQ96A72 148 aaKnown RBP16■□□□□ 0.15
VIPAS39-202ENST00000343765 IFT74Q96LB3 600 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 ATP6V0A4Q9HBG4 840 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 LRRC4CQ9HCJ2 640 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 NFS1Q9Y697 457 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 DOCK5Q9H7D0 1870 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 MIF4GDA9UHW6 222 aaKnown RBP15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 DGAT1O75907 488 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 PLTPP55058 493 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 HADHBP55084 474 aaKnown RBP15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 CDR2Q01850 454 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 C2CD6Q53TS8 623 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 SEL1L2Q5TEA6 688 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 ZNF526Q8TF50 670 aaPredicted RBP15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 SLC16A10Q8TF71 515 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 MFSD14AQ96MC6 490 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 PNMA2Q9UL42 364 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 HMGB1P1B2RPK0 211 aaPredicted RBP15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 MYO1FO00160 1098 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 FDX1P10109 184 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 ACOT2P49753 483 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 LIG4P49917 911 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 FSTL1Q12841 308 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 XRRA1Q6P2D8 792 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 ZDHHC14Q8IZN3 488 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 PRELID2Q8N945 189 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 HVCN1Q96D96 273 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 SENP7Q9BQF6 1050 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 ERP44Q9BS26 406 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 TEX13BQ9BXU2 312 aa15.99■□□□□ 0.15
VIPAS39-202ENST00000343765 PMM2O15305 246 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 GZMAP12544 262 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 SSTR3P32745 418 aaPredicted RBP15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 POLGP54098 1239 aaPredicted RBP15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 WNT7BP56706 349 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 SP2Q02086 613 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 LRIG3Q6UXM1 1119 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 MCPH1Q8NEM0 835 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 TMC2Q8TDI7 906 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 SEC14L1Q92503 715 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 NTPCRQ9BSD7 190 aaKnown RBP15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 ACAD9Q9H845 621 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 COQ4Q9Y3A0 265 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 NDUFAB1O14561 156 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 TNNI1P19237 187 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 ODF2Q5BJF6 829 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 SPOPLQ6IQ16 392 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 LLGL2Q6P1M3 1020 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 TTC27Q6P3X3 843 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 TRPM4Q8TD43 1214 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 FBXL18Q96ME1 805 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 FAM107BQ9H098 131 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 CNOT8Q9UFF9 292 aaKnown RBP15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 FEZ2Q9UHY8 353 aaPredicted RBP15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 COL11A1P12107 1806 aaPredicted RBP15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 MAFGO15525 162 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 PHF2O75151 1096 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 LSP1P33241 339 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 PEX5P50542 639 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 CNTN2Q02246 1040 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 IFFO1Q0D2I5 559 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 MTMR3Q13615 1198 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 DUPD1Q68J44 220 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 ABHD15Q6UXT9 468 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 USP37Q86T82 979 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 DDX1Q92499 740 aaKnown RBP15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 ZNF516Q92618 1163 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 TRIM7Q9C029 511 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 C1orf112Q9NSG2 853 aa15.98■□□□□ 0.15
VIPAS39-202ENST00000343765 ZNF541Q9H0D2 1346 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 KIAA1217Q5T5P2 1943 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 LRRIQ4A6NIV6 560 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 CYP1A2P05177 515 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 HARSP12081 509 aaKnown RBP15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 KCNJ1P48048 391 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 NLRP11P59045 1033 aaKnown RBP15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 BIRC3Q13489 604 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 EMC2Q15006 297 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 KRT71Q3SY84 523 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 GNPTABQ3T906 1256 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 BRDTQ58F21 947 aaPredicted RBP15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 MIS18BP1Q6P0N0 1132 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 CPA5Q8WXQ8 436 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 FNBP1Q96RU3 617 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 RPS6KC1Q96S38 1066 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 ANKFY1Q9P2R3 1169 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 GTF3C4Q9UKN8 822 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 DCDC2CA8MYV0 355 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 DKC1O60832 514 aaKnown RBP eCLIP15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 FBXO25Q8TCJ0 367 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 ZBTB45Q96K62 511 aaPredicted RBP15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 WNT8AQ9H1J5 351 aa15.97■□□□□ 0.15
VIPAS39-202ENST00000343765 C17orf75Q9HAS0 396 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms