RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 ROR2Q01974 943 aaKnown RBP18.59■□□□□ 0.57
SYDE2-202ENST00000341460 TRAPPC9Q96Q05 1148 aa18.59■□□□□ 0.57
SYDE2-202ENST00000341460 LRRC53A6NM62 1247 aa18.59■□□□□ 0.57
SYDE2-202ENST00000341460 CDH16O75309 829 aa18.59■□□□□ 0.57
SYDE2-202ENST00000341460 PSAPP07602 524 aa18.59■□□□□ 0.57
SYDE2-202ENST00000341460 CCNYL1Q8N7R7 359 aa18.59■□□□□ 0.57
SYDE2-202ENST00000341460 ASZ1Q8WWH4 475 aa18.59■□□□□ 0.57
SYDE2-202ENST00000341460 RBM41Q96IZ5 413 aaKnown RBP18.59■□□□□ 0.57
SYDE2-202ENST00000341460 NEUROG2Q9H2A3 272 aa18.59■□□□□ 0.57
SYDE2-202ENST00000341460 FAM47DPA6NHR8 397 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 RPS6P62753 249 aaKnown RBP18.58■□□□□ 0.57
SYDE2-202ENST00000341460 CCDC137Q6PK04 289 aaKnown RBP18.58■□□□□ 0.57
SYDE2-202ENST00000341460 TAGAPQ8N103 731 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 BRIP1Q9BX63 1249 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 SCN3BQ9NY72 215 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 AMACRQ9UHK6 382 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 ANKARQ7Z5J8 1434 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 GRAPQ13588 217 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 GRAPLQ8TC17 118 aaPredicted RBP18.58■□□□□ 0.57
SYDE2-202ENST00000341460 SLC12A6Q9UHW9 1150 aa18.58■□□□□ 0.57
SYDE2-202ENST00000341460 RPAP1Q9BWH6 1393 aaPredicted RBP18.58■□□□□ 0.56
SYDE2-202ENST00000341460 ERBB3P21860 1342 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 PNMA6FA0A0J9YX94 578 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 MAFGO15525 162 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 PLA2G4BP0C869 781 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 ARL4AP40617 200 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 DCTN2Q13561 401 aaKnown RBP18.58■□□□□ 0.56
SYDE2-202ENST00000341460 RESP18Q5W5W9 173 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 ZBED8Q8IZ13 594 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 LRRC39Q96DD0 335 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 DYNLL2Q96FJ2 89 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 SLC13A1Q9BZW2 595 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.58■□□□□ 0.56
SYDE2-202ENST00000341460 EFCAB14O75071 495 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 GGPS1O95749 300 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 MECOMQ03112 1051 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 PDIA2Q13087 525 aaKnown RBP18.58■□□□□ 0.56
SYDE2-202ENST00000341460 ZNF786Q8N393 782 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 TTC13Q8NBP0 860 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 IRX2Q9BZI1 471 aaPredicted RBP18.58■□□□□ 0.56
SYDE2-202ENST00000341460 SYNMO15061 1565 aa18.58■□□□□ 0.56
SYDE2-202ENST00000341460 ARHGEF37A1IGU5 675 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 MFN2O95140 757 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 ALCAMQ13740 583 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 CDC37Q16543 378 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 NDUFA5Q16718 116 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 CROCCP3Q8IVE0 287 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 EXT2Q93063 718 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 LRFN2Q9ULH4 789 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 ORC4O43929 436 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 LARGE1O95461 756 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 XPAP23025 273 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 SURF1Q15526 300 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 ZNF772Q68DY9 489 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 MTERF3Q96E29 417 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 PAIP1Q9H074 479 aaKnown RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 TRPC7Q9HCX4 862 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 ALG13Q9NP73 1137 aaKnown RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 SOX13Q9UN79 622 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 PLOD1Q02809 727 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 CCDC142Q17RM4 750 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 TBC1D10BQ4KMP7 808 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 EXOSC4Q9NPD3 245 aaKnown RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 FOXP2O15409 715 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 ENO3P13929 434 aaPredicted RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 MTERF2Q49AM1 385 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 PARD3BQ8TEW8 1205 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 QKIQ96PU8 341 aaKnown RBP eCLIP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 TMEM165Q9HC07 324 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 FAM153AQ9UHL3 310 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 LRCH1Q9Y2L9 728 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 LSM1O15116 133 aaKnown RBP18.57■□□□□ 0.56
SYDE2-202ENST00000341460 DDHD2O94830 711 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 PSMC3P17980 439 aa18.57■□□□□ 0.56
SYDE2-202ENST00000341460 USP17L3A6NCW0 530 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 USP17L4A6NCW7 530 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 TMEM247A6NEH6 219 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 GOLGA8MH3BSY2 632 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 GYS1P13807 737 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 PLCG1P19174 1290 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 TARSP26639 723 aaKnown RBP18.56■□□□□ 0.56
SYDE2-202ENST00000341460 MTF1Q14872 753 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 USP17L1Q7RTZ2 530 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 STKLD1Q8NE28 680 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 RAD17O75943 681 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 MXI1P50539 228 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 ZNF211Q13398 564 aaPredicted RBP18.56■□□□□ 0.56
SYDE2-202ENST00000341460 ARL6IP4Q66PJ3 421 aaKnown RBP18.56■□□□□ 0.56
SYDE2-202ENST00000341460 NYAP1Q6ZVC0 841 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 OR2W6PQ8NHA6 318 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 SCG3Q8WXD2 468 aaKnown RBP18.56■□□□□ 0.56
SYDE2-202ENST00000341460 GOLPH3LQ9H4A5 285 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 NOL6Q9H6R4 1146 aaKnown RBP18.56■□□□□ 0.56
SYDE2-202ENST00000341460 C6orf203Q9P0P8 240 aaPredicted RBP18.56■□□□□ 0.56
SYDE2-202ENST00000341460 RABGEF1Q9UJ41 708 aa18.56■□□□□ 0.56
SYDE2-202ENST00000341460 FNDC3AQ9Y2H6 1198 aaKnown RBP18.56■□□□□ 0.56
SYDE2-202ENST00000341460 TMEM120BA0PK00 339 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms