RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 AMIGO3Q86WK7 504 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 SYNDIG1Q9H7V2 258 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 DDX20Q9UHI6 824 aaKnown RBP13.69□□□□□ -0.22
LIN54-201ENST00000340417 PPME1Q9Y570 386 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 IKBKBO14920 756 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 EGFRP00533 1210 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 STILQ15468 1287 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 TRAPPC12Q8WVT3 735 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 HPDLQ96IR7 371 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
LIN54-201ENST00000340417 ADAM2Q99965 735 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 PFDN4Q9NQP4 134 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 KRIT1O00522 736 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 AFAP1L2Q8N4X5 818 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 GPRC5CQ9NQ84 441 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 CSDE1O75534 798 aaKnown RBP13.68□□□□□ -0.22
LIN54-201ENST00000340417 PSMC6P62333 389 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 TTC30BQ8N4P2 665 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 PPP1R13LQ8WUF5 828 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 PI4K2BG5E9Z4 385 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 ITGB3P05106 788 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 SMIM10L2AP0DMW4 78 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 SMIM10L2BP0DMW5 78 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 SAT1P21673 171 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 FGFR4P22455 802 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 RBM10P98175 930 aaKnown RBP13.68□□□□□ -0.22
LIN54-201ENST00000340417 PPIGQ13427 754 aaKnown RBP eCLIP13.68□□□□□ -0.22
LIN54-201ENST00000340417 FAM102AQ5T9C2 384 aaPredicted RBP13.68□□□□□ -0.22
LIN54-201ENST00000340417 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.68□□□□□ -0.22
LIN54-201ENST00000340417 TRIM7Q9C029 511 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 TBX20Q9UMR3 447 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 MYL4P12829 197 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
LIN54-201ENST00000340417 BCAR1P56945 870 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 C11orf70Q9BRQ4 267 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
LIN54-201ENST00000340417 S100BP04271 92 aaPredicted RBP13.68□□□□□ -0.22
LIN54-201ENST00000340417 CA4P22748 312 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 ADCY1Q08828 1119 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 ITGA7Q13683 1181 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 IFT43Q96FT9 208 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
LIN54-201ENST00000340417 A0A0G2JLL6 359 aaPredicted RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 FGBP02675 491 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 AMPD2Q01433 879 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 PRRT2Q7Z6L0 340 aaPredicted RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 C4orf19Q8IY42 314 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 NT5C1AQ9BXI3 368 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 DSEQ9UL01 958 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 EPN1Q9Y6I3 576 aaPredicted RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 KSR1Q8IVT5 923 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 DDX27Q96GQ7 796 aaKnown RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 CDY2AQ9Y6F7 541 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 PIK3R2O00459 728 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 ATP5DP30049 168 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 PPARGP37231 505 aaPredicted RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 C10orf120Q5SQS8 335 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 NIPA1Q7RTP0 329 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 OGTO15294 1046 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 XYLBO75191 536 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 TATDN1Q6P1N9 297 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 ITIH5Q86UX2 942 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 ZNF410Q86VK4 478 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 ASIC4Q96FT7 647 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 RAB17Q9H0T7 212 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 CYP4F11Q9HBI6 524 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 HPS5Q9UPZ3 1129 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 MUTP22033 750 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 HARS2P49590 506 aaKnown RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 RPL10AP62906 217 aaKnown RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 ZNF558Q96NG5 402 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 FAM49BQ9NUQ9 324 aa13.67□□□□□ -0.22
LIN54-201ENST00000340417 FAM208AQ9UK61 1670 aaKnown RBP13.67□□□□□ -0.22
LIN54-201ENST00000340417 MAP3K7O43318 606 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 LMNB2Q03252 620 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 PKN2Q16513 984 aaKnown RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 SEZ6Q53EL9 994 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 PDCL2Q8N4E4 241 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 N4BP2L2Q92802 583 aaPredicted RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 DESI2Q9BSY9 194 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 NAGPAQ9UK23 515 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 CYB561D2O14569 222 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 OPA1O60313 960 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 CKMP06732 381 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 SNRPFP62306 86 aaKnown RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 FTHL17Q9BXU8 183 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 EFCAB14O75071 495 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 RGS7P49802 495 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 RBL2Q08999 1139 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 PLD1Q13393 1074 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms