RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 TOPORSQ9NS56 1045 aaPredicted RBP12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 K7ENM7 598 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 HIP1RO75146 1068 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 CHRNA5P30532 468 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 VSTM1Q6UX27 236 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 KCNV2Q8TDN2 545 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 ARHGEF2Q92974 986 aaKnown RBP12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 CCDC127Q96BQ5 260 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 ECT2Q9H8V3 914 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 GPRC5CQ9NQ84 441 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 GTPBP10A4D1E9 387 aaKnown RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 SNX3O60493 162 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 GH2P01242 217 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 COILP38432 576 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 DHX34Q14147 1143 aaKnown RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 CAPN12Q6ZSI9 719 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 C3orf20Q8ND61 904 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 SLC17A8Q8NDX2 589 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 SPIRE2Q8WWL2 714 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 MRRFQ96E11 262 aaKnown RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 LBHD1Q9BQE6 289 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 NUP85Q9BW27 656 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 HEMGNQ9BXL5 484 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 ARHGEF10LQ9HCE6 1279 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 PIAS1O75925 651 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 CTNNA2P26232 953 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 MGAT5Q09328 741 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 AP3B2Q13367 1082 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 C1orf220Q5T0J3 134 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 TLDC1Q6P9B6 456 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 FITM2Q8N6M3 262 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 TRIM6Q9C030 488 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 FAM198AQ9UFP1 575 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 ASIC3Q9UHC3 531 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 RASAL2Q9UJF2 1139 aa12.82□□□□□ -0.36
CCDC144CP-201ENST00000340196 EME2A4GXA9 379 aaPredicted RBP12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 FAM187AA6NFU0 413 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 ANP32DO95626 131 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 CHRNA3P32297 505 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 GJC1P36383 396 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 IRX1P78414 480 aaPredicted RBP12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 KRT17Q04695 432 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 KIF22Q14807 665 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 SEL1L2Q5TEA6 688 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 SYDE2Q5VT97 1194 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 CGB2Q6NT52 195 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 RNF207Q6ZRF8 634 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 ERICH1Q86X53 443 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 SLC13A5Q86YT5 568 aaPredicted RBP12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 UBL4BQ8N7F7 174 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 ANKLE1Q8NAG6 615 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 ZNF564Q8TBZ8 553 aaPredicted RBP12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 EPS8L1Q8TE68 723 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 ZNF653Q96CK0 615 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 SAAL1Q96ER3 474 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 KREMEN1Q96MU8 473 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 LXNQ9BS40 222 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 R3HDM2Q9Y2K5 976 aaKnown RBP12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 SYNGAP1Q96PV0 1343 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 ASAP2O43150 1006 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 GAS7O60861 476 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 RTN2O75298 545 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 AGTP01019 485 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 CRKP46108 304 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 SEMA4DQ92854 862 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 CENPTQ96BT3 561 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 FAM20AQ96MK3 541 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 PAIP2Q9BPZ3 127 aaKnown RBP12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 MRIQ9BWK5 157 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 MTRF1LQ9UGC7 380 aaKnown RBP12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 USP20Q9Y2K6 914 aa12.81□□□□□ -0.36
CCDC144CP-201ENST00000340196 DIAPH2O60879 1101 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 GHRP10912 638 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 GPC5P78333 572 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 ADCY2Q08462 1091 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 MTM1Q13496 603 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 C6orf118Q5T5N4 469 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 FMNL3Q8IVF7 1028 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 SRRM1Q8IYB3 904 aaKnown RBP12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 TEKT1Q969V4 418 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 NAP1L3Q99457 506 aaPredicted RBP12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 PI4K2AQ9BTU6 479 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 POLR3CQ9BUI4 534 aaPredicted RBP12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 KLHL11Q9NVR0 708 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 PRR12Q9ULL5 1215 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 PSMD10O75832 226 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 ADRB2P07550 413 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 ACER1Q8TDN7 264 aa12.8□□□□□ -0.36
CCDC144CP-201ENST00000340196 ART4Q93070 314 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms