RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 RBAKQ9NYW8 714 aaPredicted RBP16.68■□□□□ 0.26
MBD1-203ENST00000339998 EXTL3O43909 919 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 MAFO75444 373 aaPredicted RBP16.67■□□□□ 0.26
MBD1-203ENST00000339998 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 GARTP22102 1010 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
MBD1-203ENST00000339998 LAMTOR4Q0VGL1 99 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 BRD3Q15059 726 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 RPS6KA1Q15418 735 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 AADACL2Q6P093 401 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 ADAT2Q7Z6V5 191 aaKnown RBP16.67■□□□□ 0.26
MBD1-203ENST00000339998 TMEM174Q8WUU8 243 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 HVCN1Q96D96 273 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 CEP104O60308 925 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 KIF4AO95239 1232 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 VNN1O95497 513 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 CFHP08603 1231 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 PEX26Q7Z412 305 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 KLHL7Q8IXQ5 586 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 FAM71AQ8IYT1 594 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 CTNNBL1Q8WYA6 563 aaPredicted RBP16.67■□□□□ 0.26
MBD1-203ENST00000339998 NT5C1BQ96P26 610 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 PTPN18Q99952 460 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 MINDY3Q9H8M7 445 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 RRAGCQ9HB90 399 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 NOCTQ9UK39 431 aaKnown RBP16.67■□□□□ 0.26
MBD1-203ENST00000339998 L1RE1Q9UN81 338 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
MBD1-203ENST00000339998 MAPK13O15264 365 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 ADCY3O60266 1144 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 PRLRP16471 622 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 NAA35Q5VZE5 725 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 TXLNBQ8N3L3 684 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 GPRC5AQ8NFJ5 357 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 P4HA2O15460 535 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 HLA-DRAP01903 254 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 PAFAH1B1P43034 410 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 GPC3P51654 580 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 SNRPFP62306 86 aaKnown RBP16.66■□□□□ 0.26
MBD1-203ENST00000339998 FMO1Q01740 532 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 C10orf76Q5T2E6 689 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 SHC3Q92529 594 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 APOBEC3GQ9HC16 384 aaKnown RBP16.66■□□□□ 0.26
MBD1-203ENST00000339998 COQ4Q9Y3A0 265 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 HTTP42858 3142 aa16.66■□□□□ 0.26
MBD1-203ENST00000339998 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 IQCF3P0C7M6 154 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 CYP11B1P15538 503 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 COPB2P35606 906 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 ZNF211Q13398 564 aaPredicted RBP16.65■□□□□ 0.26
MBD1-203ENST00000339998 TMC2Q8TDI7 906 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 AFAP1L1Q8TED9 768 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 KRT12Q99456 494 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 MROH8Q9H579 483 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 MSCO60682 206 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 CELF2O95319 508 aaKnown RBP16.65■□□□□ 0.26
MBD1-203ENST00000339998 CFAP221Q4G0U5 840 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 NT5DC3Q86UY8 548 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 TMEM192Q8IY95 271 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 THNSL1Q8IYQ7 743 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 A0A0B4J269 797 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 H3BQF6 201 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 INO80B-WBP1J3KQ70 363 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 CST3P01034 146 aaPredicted RBP16.65■□□□□ 0.26
MBD1-203ENST00000339998 ITGA4P13612 1032 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
MBD1-203ENST00000339998 MARCKSL1P49006 195 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 MFAP3P55082 362 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 ATP8B4Q8TF62 1192 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 AFG1LQ8WV93 481 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 INO80BQ9C086 356 aaPredicted RBP16.65■□□□□ 0.26
MBD1-203ENST00000339998 SUCLA2Q9P2R7 463 aaPredicted RBP16.65■□□□□ 0.26
MBD1-203ENST00000339998 NR2E1Q9Y466 385 aa16.65■□□□□ 0.26
MBD1-203ENST00000339998 CLDN3O15551 220 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 C4BPAP04003 597 aaKnown RBP16.64■□□□□ 0.25
MBD1-203ENST00000339998 GLI1P08151 1106 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 PIK3CAP42336 1068 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 PRAMEF19Q5SWL8 479 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 EFCAB12Q6NXP0 572 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 BBXQ8WY36 941 aaPredicted RBP16.64■□□□□ 0.25
MBD1-203ENST00000339998 CTTNBP2NLQ9P2B4 639 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 TMEM253P0C7T8 217 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 ARHGAP1Q07960 439 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 CASP8Q14790 479 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 EEF1DP3Q658K8 133 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 C15orf39Q6ZRI6 1047 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 PASD1Q8IV76 773 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 RFFLQ8WZ73 363 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 TAF4BQ92750 862 aa16.64■□□□□ 0.25
MBD1-203ENST00000339998 BTNL10A8MVZ5 291 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 PHACTR2O75167 634 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 ZBTB48P10074 688 aaPredicted RBP16.63■□□□□ 0.25
MBD1-203ENST00000339998 RFC5P40937 340 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 ZACNQ401N2 412 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 DCAF12L1Q5VU92 463 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
MBD1-203ENST00000339998 LENG1Q96BZ8 264 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms