RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CABP5Q9NP86 173 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 NENFQ9UMX5 172 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 NR2E1Q9Y466 385 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 ASPMQ8IZT6 3477 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 LRRC53A6NM62 1247 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 TP73O15350 636 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 ATP9AO75110 1047 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 NOL4O94818 638 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 EYA4O95677 639 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 HOXC6P09630 235 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 TRIM21P19474 475 aaKnown RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 PDE6CP51160 858 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 EIF3BP55884 814 aaKnown RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 GSTM4Q03013 218 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 TBC1D10BQ4KMP7 808 aaPredicted RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 TREML2Q5T2D2 321 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 KLHL7Q8IXQ5 586 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 GPBP1L1Q9HC44 474 aaPredicted RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 SAMD15Q9P1V8 674 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 BARX2Q9UMQ3 279 aaPredicted RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 MTCL1Q9Y4B5 1905 aaKnown RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 SSU72P8A0A1W2PR75 194 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 BTNL10A8MVZ5 291 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 GPAA1O43292 621 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 PCK1P35558 622 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 RTP1P59025 263 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 ODF2Q5BJF6 829 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 WASHC2DQ5SRD0 308 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 MICU3Q86XE3 530 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 LRRC43Q8N309 656 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 OLIG1Q8TAK6 271 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 NOX5Q96PH1 765 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 PHF20Q9BVI0 1012 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 DDX24Q9GZR7 859 aaKnown RBP eCLIP6□□□□□ -1.459e-6■□□□□ 8.3
CSDE1-202ENST00000339438 NLRC4Q9NPP4 1024 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 SPATA7Q9P0W8 599 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 SCAF8Q9UPN6 1271 aaKnown RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 CHKBQ9Y259 395 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 ARL2BPQ9Y2Y0 163 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 STK24Q9Y6E0 443 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 COMMD3-BMI1R4GMX3 469 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 VWA8A3KMH1 1905 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 PPP1R11O60927 126 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 ZNF189O75820 626 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 RHOBTB3O94955 611 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 IDO1P14902 403 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 TXKP42681 527 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 LIFRP42702 1097 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 SERPINB4P48594 390 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 OXCT1P55809 520 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 LACTBP83111 547 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 KCNMA1Q12791 1236 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CBX3Q13185 183 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 AUHQ13825 339 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 SPA17Q15506 151 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 DUPD1Q68J44 220 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 ANKRD40Q6AI12 368 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 MFSD5Q6N075 450 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 RGMBQ6NW40 437 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 DPY19L2P1Q6NXN4 242 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 RFWD3Q6PCD5 774 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 RINLQ6ZS11 566 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CRACR2BQ8N4Y2 399 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 INPP5DQ92835 1189 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 TUBGCP5Q96RT8 1024 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 TBC1D10AQ9BXI6 508 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 SLC26A6Q9BXS9 759 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 PACSIN1Q9BY11 444 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 MYLK2Q9H1R3 596 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CARD9Q9H257 536 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 PABPC3Q9H361 631 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 AMACRQ9UHK6 382 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CYP2D7A0A087X1C5 515 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 GOLGA6L10A0A0M3HER8 536 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 TTI1O43156 1089 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 PRDM1O75626 825 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 PAPLNO95428 1278 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 LYNP07948 512 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 ITGA2BP08514 1039 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 PABPC4LP0CB38 370 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 EDNRBP24530 442 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 GBP1P32455 592 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CD97P48960 835 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CLK2P49760 499 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 RNASE9P60153 205 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 HPCAP84074 193 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 LIN52Q52LA3 116 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 ARMCX6Q7L4S7 300 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 MIPOL1Q8TD10 442 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 SCG3Q8WXD2 468 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 IQCDQ96DY2 449 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CCDC97Q96F63 343 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 NUDCD1Q96RS6 583 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 ZKSCAN3Q9BRR0 538 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 CELF4Q9BZC1 486 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 DDX47Q9H0S4 455 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 AZI2Q9H6S1 392 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 ETNK1Q9HBU6 452 aa5.99□□□□□ -1.45
CSDE1-202ENST00000339438 INTS9Q9NV88 658 aaKnown RBP5.99□□□□□ -1.45
CSDE1-202ENST00000339438 RMND1Q9NWS8 449 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms