RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NENFQ9UMX5 172 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 SHBGP04278 402 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 CLTAP09496 248 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 PSMC2P35998 433 aaKnown RBP20.17■□□□□ 0.82
PSPC1-201ENST00000338910 RARRES1P49788 294 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 STXBP4Q6ZWJ1 553 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 HS2ST1Q7LGA3 356 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 SYCP3Q8IZU3 236 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 CCHCR1Q8TD31 782 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 TRIM51Q9BSJ1 452 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 BATF3Q9NR55 127 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 C15orf41Q9Y2V0 281 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 ATP8B3O60423 1300 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 UCHL3P15374 230 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 YWHABP31946 246 aaKnown RBP20.17■□□□□ 0.82
PSPC1-201ENST00000338910 ZNF268Q14587 947 aaPredicted RBP20.17■□□□□ 0.82
PSPC1-201ENST00000338910 NT5DC3Q86UY8 548 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 LRRC34Q8IZ02 419 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 BORCS6Q96GS4 357 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 AGPAT3Q9NRZ7 376 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 TCEAL9Q9UHQ7 104 aa20.17■□□□□ 0.82
PSPC1-201ENST00000338910 CCNE2O96020 404 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 NR3C2P08235 984 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 TRPM8Q7Z2W7 1104 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 PNMA8AQ86V59 439 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-201ENST00000338910 RDH13Q8NBN7 331 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 HES6Q96HZ4 224 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 CCDC134Q9H6E4 229 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 SLC24A3Q9HC58 644 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 TTC7AQ9ULT0 858 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-201ENST00000338910 SPDYE16A6NNV3 312 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-201ENST00000338910 K7ENM7 598 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 OAZ1P54368 228 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 TBC1D1Q86TI0 1168 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-201ENST00000338910 LMBR1Q8WVP7 490 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 L3MBTL3Q96JM7 780 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-201ENST00000338910 SPAG5Q96R06 1193 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 ZDHHC18Q9NUE0 388 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 HOXC10Q9NYD6 342 aa20.16■□□□□ 0.82
PSPC1-201ENST00000338910 A0A0A6YYK5 440 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-201ENST00000338910 ANP32DO95626 131 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 ALADP13716 330 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 PRKCIP41743 596 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 VSIG10LQ86VR7 867 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 THOC1Q96FV9 657 aaKnown RBP20.15■□□□□ 0.82
PSPC1-201ENST00000338910 SELENOSQ9BQE4 189 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 TEX13BQ9BXU2 312 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 TRIM31Q9BZY9 425 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 RAB17Q9H0T7 212 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 PABPC3Q9H361 631 aaKnown RBP20.15■□□□□ 0.82
PSPC1-201ENST00000338910 SAMD15Q9P1V8 674 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 LARSQ9P2J5 1176 aaKnown RBP20.15■□□□□ 0.82
PSPC1-201ENST00000338910 DBR1Q9UK59 544 aaKnown RBP20.15■□□□□ 0.82
PSPC1-201ENST00000338910 AGAP1Q9UPQ3 857 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 NR2E1Q9Y466 385 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 L3MBTL1Q9Y468 752 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 TREML2Q5T2D2 321 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 SYCE1Q8N0S2 351 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 RBM46Q8TBY0 533 aaKnown RBP20.15■□□□□ 0.82
PSPC1-201ENST00000338910 GCNT4Q9P109 453 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 FRMD4BQ9Y2L6 1034 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 CSADQ9Y600 493 aa20.15■□□□□ 0.82
PSPC1-201ENST00000338910 PEX10O60683 326 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 NPEPPSP55786 919 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 SH3D19Q5HYK7 790 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 DUPD1Q68J44 220 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 GJB7Q6PEY0 223 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 DAAM2Q86T65 1068 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 AGAP11Q8TF27 550 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 ELAC2Q9BQ52 826 aaKnown RBP20.14■□□□□ 0.82
PSPC1-201ENST00000338910 STRA6Q9BX79 667 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 GPRC5CQ9NQ84 441 aa20.14■□□□□ 0.82
PSPC1-201ENST00000338910 TISP43B9A030 160 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 FGGP02679 453 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 ANXA13P27216 316 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 CCND2P30279 289 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 PTENP60484 403 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 IRX1P78414 480 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-201ENST00000338910 GRIK3Q13003 919 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 FAM133BQ5BKY9 247 aaKnown RBP20.14■□□□□ 0.81
PSPC1-201ENST00000338910 PLA2G4FQ68DD2 849 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 NAIF1Q69YI7 327 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-201ENST00000338910 DMAC2Q9NW81 257 aa20.14■□□□□ 0.81
PSPC1-201ENST00000338910 CCDC169A6NNP5 214 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 WDR64B1ANS9 1081 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 ATP2A1O14983 1001 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 EXOC3O60645 756 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 H2AFZP0C0S5 128 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 PSMC5P62195 406 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 SF3A3Q12874 501 aaKnown RBP eCLIP20.13■□□□□ 0.81
PSPC1-201ENST00000338910 NFIL3Q16649 462 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 MOB2Q70IA6 237 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 H2AFVQ71UI9 128 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 RNF25Q96BH1 459 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-201ENST00000338910 PCIF1Q9H4Z3 704 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 ABCF3Q9NUQ8 709 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 INTS9Q9NV88 658 aaKnown RBP20.13■□□□□ 0.81
PSPC1-201ENST00000338910 AJAP1Q9UKB5 411 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-201ENST00000338910 UBE4BO95155 1302 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 SKAP2O75563 359 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms