RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ELMSAN1Q6PJG2 1045 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 CEP57Q86XR8 500 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 CCNYQ8ND76 341 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 TMC2Q8TDI7 906 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 PPP2R3BQ9Y5P8 575 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 PRPSAP2O60256 369 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 TBC1D12O60347 775 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 ARMCX2Q7L311 632 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 TAS1R2Q8TE23 839 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 LRRC4Q9HBW1 653 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 TBK1Q9UHD2 729 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.71□□□□□ -1.33
PRKDC-202ENST00000338368 EXTL3O43909 919 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 PSMA2P25787 234 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 IFRD2Q12894 506 aaPredicted RBP6.71□□□□□ -1.33
PRKDC-202ENST00000338368 CDO1Q16878 200 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 CCDC125Q86Z20 511 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 PNKPQ96T60 521 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 TTLL3Q9Y4R7 772 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 HUS1O60921 280 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 SUPT20HL2P0C7V6 817 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 RSRC2Q7L4I2 434 aaKnown RBP6.71□□□□□ -1.33
PRKDC-202ENST00000338368 KCTD6Q8NC69 237 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 TPCN2Q8NHX9 752 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 ETNPPLQ8TBG4 499 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 PCSK1NQ9UHG2 260 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 INTUQ9ULD6 942 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 MAD1L1Q9Y6D9 718 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 MCF2LO15068 1137 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 RAD51CO43502 376 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 ARL4AP40617 200 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 ADCY2Q08462 1091 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 C6orf118Q5T5N4 469 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 TTC13Q8NBP0 860 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 NCAPGQ9BPX3 1015 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 GTF3C4Q9UKN8 822 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 PIK3CDO00329 1044 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 EPHB6O15197 1021 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 ONECUT3O60422 494 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-202ENST00000338368 PSMC1P62191 440 aaKnown RBP6.71□□□□□ -1.34
PRKDC-202ENST00000338368 PDZD4Q76G19 769 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-202ENST00000338368 TRAPPC11Q7Z392 1133 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 SCFD2Q8WU76 684 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 MTMR8Q96EF0 704 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 ADARB2Q9NS39 739 aaKnown RBP6.71□□□□□ -1.34
PRKDC-202ENST00000338368 FRMPD4Q14CM0 1322 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 TMEM150BA6NC51 233 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 ANKRD65E5RJM6 399 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 SMC6Q96SB8 1091 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 FUT8Q9BYC5 575 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 SLC38A10Q9HBR0 1119 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 KLHL14Q9P2G3 628 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 EPC2Q52LR7 807 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 RNF225M0QZC1 329 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-202ENST00000338368 KCNA1Q09470 495 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 MUM1L1Q5H9M0 696 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 PDIK1LQ8N165 341 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 LRRN4CLQ8ND94 238 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 DYNC1LI2O43237 492 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-202ENST00000338368 GH1P01241 217 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 MYL3P08590 195 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 KIF22Q14807 665 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 IP6K2Q9UHH9 426 aa6.71□□□□□ -1.34
PRKDC-202ENST00000338368 TTI1O43156 1089 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 GARTP22102 1010 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 NAMPTP43490 491 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 KIAA1755Q5JYT7 1200 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 EFCAB12Q6NXP0 572 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 ZNF677Q86XU0 584 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 DNAAF5Q86Y56 855 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 NME8Q8N427 588 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 PI4K2AQ9BTU6 479 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 FZD1Q9UP38 647 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 RRP15Q9Y3B9 282 aaKnown RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 UBIAD1Q9Y5Z9 338 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 TROVE2P10155 538 aaKnown RBP eCLIP6.7□□□□□ -1.345e-10■□□□□ 9.2
PRKDC-202ENST00000338368 PPP6R3Q5H9R7 873 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 IER5Q5VY09 327 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 PRPF31Q8WWY3 499 aaKnown RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 ACAP3Q96P50 834 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 SGPL1O95470 568 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 GNAT1P11488 350 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 SLC12A3P55017 1021 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 BEND6Q5SZJ8 279 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 HYIQ5T013 277 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 ANKRD20A3Q5VUR7 823 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 TRIM51Q9BSJ1 452 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 GCOM2Q9BZD3 368 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 HSD3B7Q9H2F3 369 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 KLRG2A4D1S0 409 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 ASAP2O43150 1006 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 ITGB5P18084 799 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 SLC1A1P43005 524 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 HSPH1Q92598 858 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 A8MXQ7 604 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 SOX10P56693 466 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 SV2AQ7L0J3 742 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 PNMA8AQ86V59 439 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 HSD17B14Q9BPX1 270 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms