RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SMIM24O75264 130 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 DNAJC8O75937 253 aaPredicted RBP14.91□□□□□ -0.02
SF1-202ENST00000334944 PDHA1P08559 390 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 KRT13P13646 458 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 TNFAIP3P21580 790 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 RANBP1P43487 201 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 CTCFP49711 727 aaPredicted RBP14.91□□□□□ -0.02
SF1-202ENST00000334944 TUBP50607 506 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 TNIP1Q15025 636 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 ARHGEF16Q5VV41 709 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 SLC30A9Q6PML9 568 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 ARFGAP2Q8N6H7 521 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 AGBL3Q8NEM8 1001 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 ELAC2Q9BQ52 826 aaKnown RBP14.91□□□□□ -0.02
SF1-202ENST00000334944 NEUROG2Q9H2A3 272 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 TAF1DQ9H5J8 278 aaPredicted RBP14.91□□□□□ -0.02
SF1-202ENST00000334944 SLC38A10Q9HBR0 1119 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 PICK1Q9NRD5 415 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 ABCF3Q9NUQ8 709 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 HSPBP1Q9NZL4 362 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 NOP53Q9NZM5 478 aaKnown RBP14.91□□□□□ -0.02
SF1-202ENST00000334944 SYNPO2Q9UMS6 1093 aa14.91□□□□□ -0.02
SF1-202ENST00000334944 SPDYE5A6NIY4 337 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 KRIT1O00522 736 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 ERVK-9P63128 1117 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 PPP2R2AP63151 447 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
SF1-202ENST00000334944 LACTB2Q53H82 288 aaPredicted RBP14.9□□□□□ -0.02
SF1-202ENST00000334944 RNF207Q6ZRF8 634 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 CPNE8Q86YQ8 564 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 OSBPL1AQ9BXW6 950 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 SEL1LQ9UBV2 794 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 TRIM33Q9UPN9 1127 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 COL2A1P02458 1487 aaPredicted RBP14.9□□□□□ -0.02
SF1-202ENST00000334944 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 ADRB2P07550 413 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 IFNAR2P48551 515 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 ALDH5A1P51649 535 aaPredicted RBP14.9□□□□□ -0.02
SF1-202ENST00000334944 VAMP7P51809 220 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 MICALL2Q8IY33 904 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 L3MBTL3Q96JM7 780 aaPredicted RBP14.9□□□□□ -0.02
SF1-202ENST00000334944 DEFB129Q9H1M3 183 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 COG5Q9UP83 839 aa14.9□□□□□ -0.02
SF1-202ENST00000334944 DPPA5A6NC42 116 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 KRT71Q3SY84 523 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PPM1KQ8N3J5 372 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 SLC17A8Q8NDX2 589 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 SELENOSQ9BQE4 189 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 SLC5A4Q9NY91 659 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 UBIAD1Q9Y5Z9 338 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 GTPBP10A4D1E9 387 aaKnown RBP14.89□□□□□ -0.03
SF1-202ENST00000334944 WDR46O15213 610 aaKnown RBP14.89□□□□□ -0.03
SF1-202ENST00000334944 SART1O43290 800 aaKnown RBP14.89□□□□□ -0.03
SF1-202ENST00000334944 SHBGP04278 402 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 HMGCS2P54868 508 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 C1orf220Q5T0J3 134 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 NT5DC3Q86UY8 548 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 CCDC197Q8NCU1 140 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 SLC30A5Q8TAD4 765 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 LMO3Q8TAP4 145 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 CTNNBL1Q8WYA6 563 aaPredicted RBP14.89□□□□□ -0.03
SF1-202ENST00000334944 TAOK3Q9H2K8 898 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 DPH5Q9H2P9 285 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PAPOLBQ9NRJ5 636 aaKnown RBP14.89□□□□□ -0.03
SF1-202ENST00000334944 HACL1Q9UJ83 578 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 FBXL5Q9UKA1 691 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 FGGP02679 453 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PLS3P13797 630 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PCNX4Q63HM2 1172 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PHLDB2Q86SQ0 1253 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 BTBD6Q96KE9 485 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 TSC22D3Q99576 134 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PDCD2LQ9BRP1 358 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 MKNK1Q9BUB5 465 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PIM2Q9P1W9 311 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 PNMA2Q9UL42 364 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 NENFQ9UMX5 172 aa14.89□□□□□ -0.03
SF1-202ENST00000334944 RBBP6Q7Z6E9 1792 aaKnown RBP14.88□□□□□ -0.03
SF1-202ENST00000334944 RPTORQ8N122 1335 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 ATP4AP20648 1035 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 GMPSP49915 693 aaPredicted RBP14.88□□□□□ -0.03
SF1-202ENST00000334944 PAPOLAP51003 745 aaKnown RBP14.88□□□□□ -0.03
SF1-202ENST00000334944 EPC2Q52LR7 807 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 LMBRD2Q68DH5 695 aaPredicted RBP14.88□□□□□ -0.03
SF1-202ENST00000334944 BSNDQ8WZ55 320 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 ZBED3Q96IU2 234 aaPredicted RBP14.88□□□□□ -0.03
SF1-202ENST00000334944 STRA6Q9BX79 667 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 RNF146Q9NTX7 359 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 RPS6KL1Q9Y6S9 549 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 TLDC2A0PJX2 215 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 TTI1O43156 1089 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 SGPL1O95470 568 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 DLATP10515 647 aaKnown RBP14.88□□□□□ -0.03
SF1-202ENST00000334944 ADSSP30520 456 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 MARCKSL1P49006 195 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 TNNC1P63316 161 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 TAF11Q15544 211 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 DCAF12L1Q5VU92 463 aa14.88□□□□□ -0.03
SF1-202ENST00000334944 FKBP1CQ5VVH2 108 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms