RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 HERPUD2Q9BSE4 406 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 CNOT10Q9H9A5 744 aaKnown RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 INTS9Q9NV88 658 aaKnown RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 PCYOX1Q9UHG3 505 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 CCDC169A6NNP5 214 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 VIMP08670 466 aaKnown RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 RARRES1P49788 294 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 CXCL9Q07325 125 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 AUHQ13825 339 aaKnown RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 HAUS6Q7Z4H7 955 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 XXYLT1Q8NBI6 393 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 PGM2Q96G03 612 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 SCLT1Q96NL6 688 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 MXRA8Q9BRK3 442 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 RANBP17Q9H2T7 1088 aaKnown RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 LARSQ9P2J5 1176 aaKnown RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 LOXHD1Q8IVV2 1947 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 TP73O15350 636 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CHKAP35790 457 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 VPS41P49754 854 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 DRG2P55039 364 aaKnown RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 ADCY1Q08828 1119 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 RASA3Q14644 834 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CIAPIN1Q6FI81 312 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 FAM83AQ86UY5 434 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 ALAS1P13196 640 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 ADSSP30520 456 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CAP2P40123 477 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 HADHBP55084 474 aaKnown RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 SETQ01105 290 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CETN1Q12798 172 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 PPP2R5EQ16537 467 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 FAM133BQ5BKY9 247 aaKnown RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CEP57Q86XR8 500 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 FAM71AQ8IYT1 594 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CPXCR1Q8N123 301 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CCDC197Q8NCU1 140 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 C3orf20Q8ND61 904 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 ACTR5Q9H9F9 607 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 AAASQ9NRG9 546 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 CHST7Q9NS84 486 aa13.21□□□□□ -0.29
VPS33B-201ENST00000333371 MTRF1LQ9UGC7 380 aaKnown RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 MRPL11Q9Y3B7 192 aaKnown RBP13.21□□□□□ -0.29
VPS33B-201ENST00000333371 PFASO15067 1338 aa13.21□□□□□ -0.3
VPS33B-201ENST00000333371 TBC1D12O60347 775 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 ZBTB7AO95365 584 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 CDR1P51861 262 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 DRP2Q13474 957 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 E2F5Q15329 346 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 PPP1R7Q15435 360 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 MTMR14Q8NCE2 650 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 TAOK3Q9H2K8 898 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 CDC42EP4Q9H3Q1 356 aaKnown RBP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 KCND2Q9NZV8 630 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 O00370 1275 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 WNT10BO00744 389 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 HGSO14964 777 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 CYP11B1P15538 503 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 DALRD3Q5D0E6 543 aaKnown RBP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 EXOC3L1Q86VI1 746 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 ART4Q93070 314 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 MYOZ2Q9NPC6 264 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 ABCF3Q9NUQ8 709 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 USP20Q9Y2K6 914 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 LOC102724159A0A0B4J2E5 919 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 PODXLO00592 558 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 ASNSP08243 561 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 PLS3P13797 630 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 KRT17Q04695 432 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 TNIP1Q15025 636 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 PWP2Q15269 919 aaKnown RBP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 SNRNP35Q16560 246 aaKnown RBP13.2□□□□□ -0.3
VPS33B-201ENST00000333371 SPDYCQ5MJ68 293 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 FAM102BQ5T8I3 360 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 TAX1BP1Q86VP1 789 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 CENPTQ96BT3 561 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms