RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 FAM102BQ5T8I3 360 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 PDE12Q6L8Q7 609 aaKnown RBP10.68□□□□□ -0.7
SYN3-201ENST00000332840 ZNF598Q86UK7 904 aaKnown RBP10.68□□□□□ -0.7
SYN3-201ENST00000332840 DDX12PQ92771 950 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 IFT74Q96LB3 600 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 ZNF558Q96NG5 402 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 BHMT2Q9H2M3 363 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 TYW1Q9NV66 732 aaKnown RBP10.68□□□□□ -0.7
SYN3-201ENST00000332840 KCND2Q9NZV8 630 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 KANSL3Q9P2N6 904 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 STK39Q9UEW8 545 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 PUF60Q9UHX1 559 aaKnown RBP10.68□□□□□ -0.7
SYN3-201ENST00000332840 KCNG1Q9UIX4 513 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
SYN3-201ENST00000332840 LRRIQ4A6NIV6 560 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 GOLGA6L6A8MZA4 724 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 EYA4O95677 639 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 SSBP05455 408 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYN3-201ENST00000332840 PTMAP06454 111 aaKnown RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 CDC25BP30305 580 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 NAMPTP43490 491 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 KRT17Q04695 432 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 MBTD1Q05BQ5 628 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 COBLL1Q53SF7 1204 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 HS1BP3Q53T59 392 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 TMEM31Q5JXX7 168 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 SPATA1Q5VX52 437 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 CDCA2Q69YH5 1023 aaPredicted RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 KLHL10Q6JEL2 608 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 DYMQ7RTS9 669 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 APBB1IPQ7Z5R6 666 aaPredicted RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 ALYREFQ86V81 257 aaKnown RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 GPBP1Q86WP2 473 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 CCDC65Q8IXS2 484 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 THNSL1Q8IYQ7 743 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 SYT2Q8N9I0 419 aaPredicted RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 KLHL23Q8NBE8 558 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 DEPTORQ8TB45 409 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 URGCPQ8TCY9 931 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 ASAP3Q8TDY4 903 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 MRFAP1L1Q96HT8 127 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 DRC1Q96MC2 740 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 CASD1Q96PB1 797 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 TRIM6Q9C030 488 aaPredicted RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 MINDY3Q9H8M7 445 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 C17orf75Q9HAS0 396 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 PRMT7Q9NVM4 692 aaPredicted RBP10.67□□□□□ -0.7
SYN3-201ENST00000332840 RWDD2AQ9UIY3 292 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 PCDHB2Q9Y5E7 798 aa10.67□□□□□ -0.7
SYN3-201ENST00000332840 ZMYM2Q9UBW7 1377 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 PSMA7O14818 248 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 CBFA2T2O43439 604 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 TSPAN1O60635 241 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 ITGB1P05556 798 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 KRT18P05783 430 aaKnown RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 IDEP14735 1019 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 ATF7P17544 494 aaPredicted RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 SCP2P22307 547 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 HOXA11P31270 313 aaPredicted RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 PRCPP42785 496 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 ALDH7A1P49419 539 aaKnown RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 GATMP50440 423 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 SLC12A3P55017 1021 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 FANCCQ00597 558 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 PLCB3Q01970 1234 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 PAK1Q13153 545 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 MAPK6Q16659 721 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 TPD52L1Q16890 204 aaPredicted RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 FAM187BQ17R55 369 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 PUS10Q3MIT2 529 aaKnown RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 NOMO2Q5JPE7 1267 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 CLLU1OSQ5K130 101 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 KCNT2Q6UVM3 1135 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 MRPL10Q7Z7H8 261 aaKnown RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 SMYD4Q8IYR2 804 aaPredicted RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 ADSSL1Q8N142 457 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 COLGALT1Q8NBJ5 622 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 HELQQ8TDG4 1101 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 NELFBQ8WX92 580 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 DNAJC19Q96DA6 116 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 DHTKD1Q96HY7 919 aaPredicted RBP10.66□□□□□ -0.7
SYN3-201ENST00000332840 CD320Q9NPF0 282 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 C11orf16Q9NQ32 467 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 FANCLQ9NW38 375 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 FAM50BQ9Y247 325 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 GDAQ9Y2T3 454 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 NFE2L3Q9Y4A8 694 aa10.66□□□□□ -0.7
SYN3-201ENST00000332840 GRM6O15303 877 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 FGF18O76093 207 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 TPM3P06753 285 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 CDK11BP21127 795 aaKnown RBP10.65□□□□□ -0.7
SYN3-201ENST00000332840 STX17P56962 302 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 RNASELQ05823 741 aaKnown RBP10.65□□□□□ -0.7
SYN3-201ENST00000332840 DMP1Q13316 513 aaPredicted RBP10.65□□□□□ -0.7
SYN3-201ENST00000332840 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 SLC27A1Q6PCB7 646 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 MAEAQ7L5Y9 396 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 DRC7Q8IY82 874 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms