RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 SPIRE2Q8WWL2 714 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 RNF34Q969K3 372 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
SHC4-201ENST00000332408 DNAJB2P25686 324 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 PCSK1P29120 753 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
SHC4-201ENST00000332408 COASYQ13057 564 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 PLD1Q13393 1074 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 PNOCQ13519 176 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 IPO4Q8TEX9 1081 aaKnown RBP12.41□□□□□ -0.42
SHC4-201ENST00000332408 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 REEP2Q9BRK0 252 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 CENPHQ9H3R5 247 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 FAM105AQ9NUU6 356 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.41□□□□□ -0.42
SHC4-201ENST00000332408 TYW5A2RUC4 315 aaKnown RBP12.41□□□□□ -0.42
SHC4-201ENST00000332408 CNGA4Q8IV77 575 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 KLK14Q9P0G3 267 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 CASP8AP2Q9UKL3 1982 aa12.41□□□□□ -0.42
SHC4-201ENST00000332408 POMCP01189 267 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 FGFR4P22455 802 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 GHRHRQ02643 423 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 IFRD2Q12894 506 aaPredicted RBP12.4□□□□□ -0.42
SHC4-201ENST00000332408 LHX8Q68G74 356 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 ETNPPLQ8TBG4 499 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 HELQQ8TDG4 1101 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 ACSF2Q96CM8 615 aaPredicted RBP12.4□□□□□ -0.42
SHC4-201ENST00000332408 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 GOLGA8IPA6NC78 632 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 GOLGA8JA6NMD2 632 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 EML1O00423 815 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 CLIC2O15247 247 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 CLCN1P35523 988 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 NPTX2P47972 431 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 FAM193AP78312 1265 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 FKBP3Q00688 224 aaKnown RBP12.4□□□□□ -0.42
SHC4-201ENST00000332408 IFI16Q16666 785 aaKnown RBP12.4□□□□□ -0.42
SHC4-201ENST00000332408 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
SHC4-201ENST00000332408 SCN4BQ8IWT1 228 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 DHTKD1Q96HY7 919 aaPredicted RBP12.4□□□□□ -0.42
SHC4-201ENST00000332408 CPB2Q96IY4 423 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
SHC4-201ENST00000332408 TAF6P49848 677 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 PTENP60484 403 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 KRT83P78385 493 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 FBXO47Q5MNV8 452 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 ZPBP2Q6X784 338 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 NT5C1BQ96P26 610 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 LTBP1Q14766 1721 aa12.4□□□□□ -0.42
SHC4-201ENST00000332408 MACROD2A1Z1Q3 448 aa12.4□□□□□ -0.43
SHC4-201ENST00000332408 NAALADL2Q58DX5 795 aa12.4□□□□□ -0.43
SHC4-201ENST00000332408 CCDC149Q6ZUS6 474 aa12.4□□□□□ -0.43
SHC4-201ENST00000332408 RSRC2Q7L4I2 434 aaKnown RBP12.4□□□□□ -0.43
SHC4-201ENST00000332408 FAM126BQ8IXS8 530 aa12.4□□□□□ -0.43
SHC4-201ENST00000332408 CRACR2AQ9BSW2 395 aa12.4□□□□□ -0.43
SHC4-201ENST00000332408 POLD4Q9HCU8 107 aa12.4□□□□□ -0.43
SHC4-201ENST00000332408 TYW1Q9NV66 732 aaKnown RBP12.4□□□□□ -0.43
SHC4-201ENST00000332408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.4□□□□□ -0.43
SHC4-201ENST00000332408 SF3B1O75533 1304 aaKnown RBP eCLIP12.39□□□□□ -0.43
SHC4-201ENST00000332408 KIF5AQ12840 1032 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 MAPRE1Q15691 268 aaKnown RBP12.39□□□□□ -0.43
SHC4-201ENST00000332408 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 TNIP3Q96KP6 325 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 TMEM134Q9H6X4 195 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 GPRC5CQ9NQ84 441 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
SHC4-201ENST00000332408 UMODL1Q5DID0 1318 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 IGLV3-22A0A075B6J6 115 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 NDUFA8P51970 172 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 GRIK3Q13003 919 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 IGSF22Q8N9C0 903 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
SHC4-201ENST00000332408 RB1P06400 928 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 ZNF75DP51815 510 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 RESP18Q5W5W9 173 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 SPATA2LQ8IUW3 424 aaPredicted RBP12.39□□□□□ -0.43
SHC4-201ENST00000332408 PCDHA11Q9Y5I1 949 aa12.39□□□□□ -0.43
SHC4-201ENST00000332408 CTGFP29279 349 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 GBP2P32456 591 aaPredicted RBP12.38□□□□□ -0.43
SHC4-201ENST00000332408 MXI1P50539 228 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
SHC4-201ENST00000332408 ZNF699Q32M78 642 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 MAP9Q49MG5 647 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 KRT86O43790 486 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
SHC4-201ENST00000332408 CXCL14O95715 111 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 MAPTP10636 758 aaKnown RBP12.38□□□□□ -0.43
SHC4-201ENST00000332408 NMT1P30419 496 aaKnown RBP12.38□□□□□ -0.43
SHC4-201ENST00000332408 KIAA0319LQ8IZA0 1049 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 C16orf70Q9BSU1 422 aa12.38□□□□□ -0.43
SHC4-201ENST00000332408 KIAA1551Q9HCM1 1747 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms