RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 GPD1LQ8N335 351 aa10.33□□□□□ -0.76
C11orf54-201ENST00000331239 MFSD14AQ96MC6 490 aa10.33□□□□□ -0.76
C11orf54-201ENST00000331239 SRRTQ9BXP5 876 aaKnown RBP10.33□□□□□ -0.76
C11orf54-201ENST00000331239 PLEKHA5Q9HAU0 1116 aa10.33□□□□□ -0.76
C11orf54-201ENST00000331239 TRMT13Q9NUP7 481 aaKnown RBP10.33□□□□□ -0.76
C11orf54-201ENST00000331239 ABLIM1O14639 778 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 TSPAN1O60635 241 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 ZNF623O75123 536 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 DMTNQ08495 405 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 NR1I3Q14994 352 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 KIZQ2M2Z5 673 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 FILIP1LQ4L180 1135 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 TCP11X2Q5H9J9 407 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 SLC27A1Q6PCB7 646 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 CATSPER4Q7RTX7 472 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 KSR1Q8IVT5 923 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 NELFCDQ8IXH7 590 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 GLIS3Q8NEA6 775 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 NOC4LQ9BVI4 516 aaKnown RBP10.32□□□□□ -0.76
C11orf54-201ENST00000331239 UBN1Q9NPG3 1134 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 HSPBP1Q9NZL4 362 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 TBX21Q9UL17 535 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 MAPK8IP1Q9UQF2 711 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 DERAQ9Y315 318 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 ZNF233A6NK53 670 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 EFCAB14O75071 495 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 N4BP1O75113 896 aaKnown RBP10.32□□□□□ -0.76
C11orf54-201ENST00000331239 RPS6KA5O75582 802 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 IL18RAPO95256 599 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 CXCL10P02778 98 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 CLTAP09496 248 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 ADKP55263 362 aaKnown RBP10.32□□□□□ -0.76
C11orf54-201ENST00000331239 CHMP4BP1P59074 171 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 CLDN10P78369 228 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 LRRC8DQ7L1W4 858 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 APTXQ7Z2E3 356 aaKnown RBP10.32□□□□□ -0.76
C11orf54-201ENST00000331239 LRRN4CLQ8ND94 238 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 POMGNT1Q8WZA1 660 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 BORCS6Q96GS4 357 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 TRPV6Q9H1D0 765 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 ERVK-5Q9HDB9 667 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 C1orf112Q9NSG2 853 aa10.32□□□□□ -0.76
C11orf54-201ENST00000331239 AGO2Q9UKV8 859 aaKnown RBP10.32□□□□□ -0.76
C11orf54-201ENST00000331239 GTPBP10A4D1E9 387 aaKnown RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 EXOC3O60645 756 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 CLTBP09497 229 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 KRT13P13646 458 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 ADSSP30520 456 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 PMS1P54277 932 aaKnown RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 TLE2Q04725 743 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 FAAP100Q0VG06 881 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 ERCC6LQ2NKX8 1250 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 SLC39A4Q6P5W5 647 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 PAWRQ96IZ0 340 aaKnown RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 MSTO1Q9BUK6 570 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 TARS2Q9BW92 718 aaKnown RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 MINDY3Q9H8M7 445 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 ARMCX3Q9UH62 379 aaPredicted RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 KCNJ18B7U540 433 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 FANCGO15287 622 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 H2AFXP16104 143 aaPredicted RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 ARF4P18085 180 aaPredicted RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 PAX3P23760 479 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 HOXA11P31270 313 aaPredicted RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 GRM5P41594 1212 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 STX17P56962 302 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 KCNA1Q09470 495 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 PAK2Q13177 524 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 KCNJ12Q14500 433 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 DSC3Q14574 896 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 MAN2A1Q16706 1144 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 ZNF618Q5T7W0 954 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 TOGARAM2Q6ZUX3 1019 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 MRPL10Q7Z7H8 261 aaKnown RBP10.31□□□□□ -0.76
C11orf54-201ENST00000331239 IRF2BP1Q8IU81 584 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 TRIM59Q8IWR1 403 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 MNS1Q8NEH6 495 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 FAXDC2Q96IV6 333 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 OSMRQ99650 979 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 HTATIP2Q9BUP3 242 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 KIFC3Q9BVG8 833 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 PDZD7Q9H5P4 517 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 ASB7Q9H672 318 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 POLD4Q9HCU8 107 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 USP20Q9Y2K6 914 aa10.31□□□□□ -0.76
C11orf54-201ENST00000331239 RALGAPA2Q2PPJ7 1873 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 CARNS1A5YM72 827 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 AKR1B15C9JRZ8 316 aaPredicted RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 ANKRD63C9JTQ0 380 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 URI1O94763 535 aaPredicted RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 LPIN1Q14693 890 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 PSMD6Q15008 389 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 FAM228AQ86W67 206 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 FAM186BQ8IYM0 893 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 PANX2Q96RD6 677 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 ELAC1Q9H777 363 aaKnown RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 NOC2LQ9Y3T9 749 aaKnown RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 TRIM49BA6NDI0 452 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 INPPL1O15357 1258 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms