RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 DRAP1Q14919 205 aaPredicted RBP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 SGSM1Q2NKQ1 1148 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 C11orf63Q6NUN7 778 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 CCDC105Q8IYK2 499 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 UIMC1Q96RL1 719 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 PI4KBQ9UBF8 816 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 PLIN4Q96Q06 1357 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 ANKRD62A6NC57 917 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 AKR1B1P15121 316 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 SHMT1P34896 483 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 COILP38432 576 aaPredicted RBP19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 TRAF1Q13077 416 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 SNX1Q13596 522 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 PALB2Q86YC2 1186 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 FAM13CQ8NE31 585 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 TEKT4Q8WW24 435 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 GRAMD1AQ96CP6 724 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 STK33Q9BYT3 514 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 AAASQ9NRG9 546 aa19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 SEPT11Q9NVA2 429 aaKnown RBP19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 ZBTB12Q9Y330 459 aaPredicted RBP19.38■□□□□ 0.69
CLSTN3-202ENST00000331148 DDTLA6NHG4 134 aaPredicted RBP19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 GIT2Q14161 759 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 CTTNQ14247 550 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 CYP1B1Q16678 543 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 SEL1L2Q5TEA6 688 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 ENDOVQ8N8Q3 282 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 ASAP3Q8TDY4 903 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 SYT15Q9BQS2 421 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 TYW1Q9NV66 732 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 MTMR4Q9NYA4 1195 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 DNAJC12Q9UKB3 198 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 ASB3Q9Y575 518 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 TCRBV7S2A1N4TA0A589 114 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 POTEFA5A3E0 1075 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 MED24O75448 989 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 ATP5HO75947 161 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 POTEIP0CG38 1075 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 ACADSP16219 412 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 RPL13P26373 211 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 PTGER2P43116 358 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 PEX5P50542 639 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 HADHBP55084 474 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 RNASELQ05823 741 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 CALCOCO2Q13137 446 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 POTEGQ6S5H5 508 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 POTEEQ6S8J3 1075 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 RHOT2Q8IXI1 618 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 JDP2Q8WYK2 163 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 TMEM237Q96Q45 408 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 NUDCD1Q96RS6 583 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 GPR88Q9GZN0 384 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 BCS1LQ9Y276 419 aa19.37■□□□□ 0.69
CLSTN3-202ENST00000331148 FER1L6Q2WGJ9 1857 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 ENTPD3O75355 529 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 TAC1P20366 129 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 TNFAIP3P21580 790 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 SH3BP5LQ7L8J4 393 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 VSIG1Q86XK7 387 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 GALNT15Q8N3T1 639 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 AGBL3Q8NEM8 1001 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 ERP27Q96DN0 273 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 SPDYE2BA6NHP3 402 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 TMEM110-MUSTN1A8MSY1 372 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 EYA4O95677 639 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 SPDYE6P0CI01 402 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 TARSP26639 723 aaKnown RBP19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 GCLCP48506 637 aaPredicted RBP19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 CLK2P49760 499 aaKnown RBP19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 POLGP54098 1239 aaPredicted RBP19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 CXCL9Q07325 125 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 SETDB1Q15047 1291 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 DLGAP5Q15398 846 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 ARHGEF18Q6ZSZ5 1173 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 CCDC17Q96LX7 622 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 REEP2Q9BRK0 252 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 PCDHB13Q9Y5F0 798 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 FRMPD4Q14CM0 1322 aa19.36■□□□□ 0.69
CLSTN3-202ENST00000331148 IGKV6D-41A0A0C4DH26 115 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 SLC26A4O43511 780 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 MYBL1P10243 752 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 FOXN2P32314 431 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 STAT3P40763 770 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 KCNJ1P48048 391 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 LMNB2Q03252 620 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 STRN3Q13033 797 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 BMT2Q1RMZ1 405 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 TSNAXIP1Q2TAA8 658 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 INPP5DQ92835 1189 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 PITPNM3Q9BZ71 974 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 PIDD1Q9HB75 910 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 NKIRAS1Q9NYS0 192 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 TMOD2Q9NZR1 351 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 CTTNBP2NLQ9P2B4 639 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 ADGRA3Q8IWK6 1321 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 NFKBIEO00221 500 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 CLIC2O15247 247 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 TP73O15350 636 aa19.35■□□□□ 0.69
CLSTN3-202ENST00000331148 RTN3O95197 1032 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms