RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 PSMC6P62333 389 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 MTMR2Q13614 643 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 DAB2IPQ5VWQ8 1189 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 SPATA31D4Q6ZUB0 917 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 TUBGCP5Q96RT8 1024 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 MIPEPQ99797 713 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 CADM1Q9BY67 442 aaKnown RBP21.95■■□□□ 1.1
CMTM4-201ENST00000330687 CHST7Q9NS84 486 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 CLIC5Q9NZA1 410 aa21.95■■□□□ 1.1
CMTM4-201ENST00000330687 STK10O94804 968 aaKnown RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 EPHA7Q15375 998 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 KNOP1Q1ED39 458 aaKnown RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 TBC1D10BQ4KMP7 808 aaPredicted RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 JDP2Q8WYK2 163 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 PIGBQ92521 554 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 NSUN4Q96CB9 384 aaKnown RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 ANKRD27Q96NW4 1050 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 MYH3P11055 1940 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 BHMG1C9JSJ3 638 aaPredicted RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 RPA3P35244 121 aaPredicted RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 SLC16A2P36021 539 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 SKIV2L2P42285 1042 aaKnown RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 WASHC2DQ5SRD0 308 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 MFSD5Q6N075 450 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 DDX27Q96GQ7 796 aaKnown RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 ZSWIM1Q9BR11 485 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 TRABDQ9H4I3 376 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 NINJ2Q9NZG7 142 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 CDH16O75309 829 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 ESRRAP11474 423 aaPredicted RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 CYP11B2P19099 503 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 SPDYCQ5MJ68 293 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 SLC30A10Q6XR72 485 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 SLC13A5Q86YT5 568 aaPredicted RBP21.94■■□□□ 1.1
CMTM4-201ENST00000330687 ART4Q93070 314 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 MTMR9Q96QG7 549 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 HEY2Q9UBP5 337 aa21.94■■□□□ 1.1
CMTM4-201ENST00000330687 FOXN3O00409 490 aaPredicted RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 TBCAO75347 108 aaKnown RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 HAUS5O94927 633 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 FAM200BP0CF97 657 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 RTP1P59025 263 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 SLC34A1Q06495 639 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 COBLL1Q53SF7 1204 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 FAM186BQ8IYM0 893 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 GRAMD1AQ96CP6 724 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 ARL8BQ9NVJ2 186 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 E7ENQ6 273 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 SERPINB3P29508 390 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 PKN2Q16513 984 aaKnown RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 C2CD6Q53TS8 623 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 ACBD5Q5T8D3 534 aaPredicted RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 SLC35C1Q96A29 364 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 AAASQ9NRG9 546 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 SLC4A7Q9Y6M7 1214 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 DDX60Q8IY21 1712 aaKnown RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 CALUO43852 315 aaPredicted RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 GSTA2P09210 222 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 PPATQ06203 517 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 KBTBD2Q8IY47 623 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 DAGLBQ8NCG7 672 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 PRR11Q96HE9 360 aaPredicted RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 DNAJC18Q9H819 358 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 DMAP1Q9NPF5 467 aaPredicted RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 USP20Q9Y2K6 914 aa21.93■■□□□ 1.1
CMTM4-201ENST00000330687 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.93■■□□□ 1.1
CMTM4-201ENST00000330687 A0A0A6YYK5 440 aaPredicted RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 GOLGA8SH3BPF8 625 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 GOLGA8MH3BSY2 632 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 PSMG1O95456 288 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 RIBC1Q8N443 379 aaPredicted RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 SAYSD1Q9NPB0 183 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 UBE2TQ9NPD8 197 aaPredicted RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 DDX18Q9NVP1 670 aaKnown RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 RPL13P26373 211 aaKnown RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 PRKCIP41743 596 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 DRG2P55039 364 aaKnown RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 P3H1Q32P28 736 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 CCDC62Q6P9F0 684 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 ARHGAP27Q6ZUM4 889 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 BICD1Q96G01 975 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 LMNAP02545 664 aaKnown RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 LYNP07948 512 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 PCP11498 1178 aaKnown RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 COG2Q14746 738 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 LVRNQ6Q4G3 990 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 FAM136AQ96C01 138 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 CLPTM1LQ96KA5 538 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 TRAPPC9Q96Q05 1148 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 EYA3Q99504 573 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 ZNF184Q99676 751 aaPredicted RBP21.92■■□□□ 1.1
CMTM4-201ENST00000330687 ATP8A2Q9NTI2 1148 aa21.92■■□□□ 1.1
CMTM4-201ENST00000330687 TROVE2P10155 538 aaKnown RBP eCLIP21.91■■□□□ 1.1
CMTM4-201ENST00000330687 AMPD1P23109 780 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 YARSP54577 528 aaKnown RBP21.91■■□□□ 1.1
CMTM4-201ENST00000330687 SLC30A5Q8TAD4 765 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 INPP5DQ92835 1189 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 REEP2Q9BRK0 252 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 SIX2Q9NPC8 291 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms