RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CCDC105Q8IYK2 499 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 IL31RAQ8NI17 732 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 HELQQ8TDG4 1101 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 SEMA4DQ92854 862 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 ZNF622Q969S3 477 aaKnown RBP eCLIP9.34□□□□□ -0.918e-9■■■■□ 20.1
CLK1-201ENST00000321356 IWS1Q96ST2 819 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 ACP6Q9NPH0 428 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 AAASQ9NRG9 546 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 FBXO28Q9NVF7 368 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 HAUS2Q9NVX0 235 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 GEMIN8Q9NWZ8 242 aaKnown RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 WHRNQ9P202 907 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 COL20A1Q9P218 1284 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 FEM1BQ9UK73 627 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 SLC12A4Q9UP95 1085 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 UBIAD1Q9Y5Z9 338 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 SPDYE2BA6NHP3 402 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 DDX39AO00148 427 aaKnown RBP9.33□□□□□ -0.92
CLK1-201ENST00000321356 ICAM1P05362 532 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 SPDYE6P0CI01 402 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 ADSSP30520 456 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 PTGER2P43116 358 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 KCNJ1P48048 391 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 CNGA2Q16280 664 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 SNRNP35Q16560 246 aaKnown RBP9.33□□□□□ -0.92
CLK1-201ENST00000321356 TKFCQ3LXA3 575 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 RNF207Q6ZRF8 634 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 FAM228AQ86W67 206 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 CBWD2Q8IUF1 395 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 PPM1KQ8N3J5 372 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 ANKS4BQ8N8V4 417 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 SLC17A8Q8NDX2 589 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 PARD3BQ8TEW8 1205 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 FAM151AQ8WW52 585 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 AKT1S1Q96B36 256 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 ZNF653Q96CK0 615 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 BTBD6Q96KE9 485 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 MTFR1LQ9H019 292 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 AGO4Q9HCK5 861 aaKnown RBP9.33□□□□□ -0.92
CLK1-201ENST00000321356 CD248Q9HCU0 757 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.33□□□□□ -0.92
CLK1-201ENST00000321356 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
CLK1-201ENST00000321356 CNTNAP1P78357 1384 aa9.33□□□□□ -0.92
CLK1-201ENST00000321356 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 SMIM23A6NLE4 172 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 YDJCA8MPS7 323 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 SLC16A4O15374 487 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 MGRN1O60291 552 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 OAS1P00973 400 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 IVDP26440 423 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 YWHABP31946 246 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 MAP2K1Q02750 393 aaPredicted RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 TNIP1Q15025 636 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 SNCBQ16143 134 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 AOC3Q16853 763 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PREPLQ4J6C6 727 aaPredicted RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 WLSQ5T9L3 541 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PCNX4Q63HM2 1172 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 KRT39Q6A163 491 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 ACAD10Q6JQN1 1059 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TAOK1Q7L7X3 1001 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 RPAINQ86UA6 219 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 EXOC3L1Q86VI1 746 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 MAP4K3Q8IVH8 894 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 C4orf19Q8IY42 314 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 C7orf43Q8WVR3 580 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 CLEC4DQ8WXI8 215 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 FBXL18Q96ME1 805 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 SERPINB12Q96P63 405 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PRMT1Q99873 361 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 TACO1Q9BSH4 297 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 CDC42EP4Q9H3Q1 356 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 TMEM8AQ9HCN3 771 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PTPN22Q9Y2R2 807 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 GOLGA8IPA6NC78 632 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 GOLGA8JA6NMD2 632 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TCP10L2B9ZVM9 353 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 CLDN3O15551 220 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TBC1D12O60347 775 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TCEA3O75764 348 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 ITIH2P19823 946 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 GTF2H1P32780 548 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 SLCO1A2P46721 670 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PDE6CP51160 858 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PEX3P56589 373 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 MRPS9P82933 396 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 KRT17Q04695 432 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 ENPEPQ07075 957 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 CALCOCO2Q13137 446 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PTK6Q13882 451 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 UGCGQ16739 394 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 CLEC16AQ2KHT3 1053 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 SGO2Q562F6 1265 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 SYDE1Q6ZW31 735 aaPredicted RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 PLCD3Q8N3E9 789 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TMEM161BQ8NDZ6 487 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms