RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 GIT2Q14161 759 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 ZRSR1Q15695 479 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 C1orf229Q6ZS94 237 aaPredicted RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 GPBP1Q86WP2 473 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TTC39CQ8N584 583 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 BEND7Q8N7W2 519 aaPredicted RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CYP2W1Q8TAV3 490 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 LMBR1Q8WVP7 490 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 SENP6Q9GZR1 1112 aaPredicted RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TMEM51Q9NW97 253 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TBX21Q9UL17 535 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 ABHD14A-ACY1A0A1B0GW23 586 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 SHISA8B8ZZ34 492 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 XPOTO43592 962 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 ZNF623O75123 536 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 IL18RAPO95256 599 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 EOMESO95936 686 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TFRCP02786 760 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CLTBP09497 229 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 INSRRP14616 1297 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 ATP4AP20648 1035 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 RFX1P22670 979 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 RNF144AP50876 292 aaPredicted RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 NDUFA8P51970 172 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 NLRP12P59046 1061 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 STRN3Q13033 797 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 USP4Q13107 963 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 UVSSAQ2YD98 709 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CNKSR3Q6P9H4 555 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TPH2Q8IWU9 490 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 PGBD4Q96DM1 585 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 POM121Q96HA1 1249 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 UROC1Q96N76 676 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 MRPL4Q9BYD3 311 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 FZD8Q9H461 694 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 SUV39H2Q9H5I1 410 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 METTL14Q9HCE5 456 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 PRM3Q9NNZ6 103 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TYW1Q9NV66 732 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 RWDD2AQ9UIY3 292 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TNFSF13BQ9Y275 285 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 NR2E3Q9Y5X4 410 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 USP3Q9Y6I4 520 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 FNDC1Q4ZHG4 1894 aaPredicted RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 NLRC5Q86WI3 1866 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 ACKR2O00590 384 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 PSMA7O14818 248 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 POLR2DO15514 142 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 ADCY6O43306 1168 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 KLRC4O43908 158 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 RPN1P04843 607 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CCDC192P0DO97 292 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CYP3A5P20815 502 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 PROZP22891 400 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 MARCKSP29966 332 aaPredicted RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CNGA1P29973 690 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 GPC3P51654 580 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 MAPK7Q13164 816 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 FAM26FQ5R3K3 315 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 MARCH8Q5T0T0 291 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 RTL10Q7L3V2 364 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 MRPL10Q7Z7H8 261 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CKAP2LQ8IYA6 745 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TMEM199Q8N511 208 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 NANOS1Q8WY41 292 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 CELF4Q9BZC1 486 aaKnown RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 ADAMTS10Q9H324 1103 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 THAP9Q9H5L6 903 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 PANK4Q9NVE7 773 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 MAFFQ9ULX9 164 aa3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TRIP12Q14669 1992 aaPredicted RBP3.61□□□□□ -1.83
SCAMP1-201ENST00000320280 TRAK2O60296 914 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 GPR37L1O60883 481 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 TIMP1P01033 207 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 KRT18P05783 430 aaKnown RBP3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 STAG3L1P0CL83 205 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 CYP2C9P11712 490 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 DARSP14868 501 aaKnown RBP3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 GDF10P55107 478 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 COASYQ13057 564 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 KARSQ15046 597 aaKnown RBP3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 PTGISQ16647 500 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 MAPK6Q16659 721 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 UGCGQ16739 394 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 PLA2G4EQ3MJ16 856 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 MYOCDQ8IZQ8 938 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 BANK1Q8NDB2 785 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 DEPTORQ8TB45 409 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 UBE2Q2Q8WVN8 375 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 EDARADDQ8WWZ3 215 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 SEPT8Q92599 483 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 JAKMIP2Q96AA8 810 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 FBXL18Q96ME1 805 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 DEFB118Q96PH6 123 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 MRPL9Q9BYD2 267 aaKnown RBP3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 POLR3FQ9H1D9 316 aaPredicted RBP3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 BHMT2Q9H2M3 363 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 NEUROD4Q9HD90 331 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 KMT5AQ9NQR1 393 aa3.6□□□□□ -1.83
SCAMP1-201ENST00000320280 XPNPEP1Q9NQW7 623 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms