RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 ESYT3A0FGR9 886 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 CSPG5O95196 566 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 PLTPP55058 493 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 TBX2Q13207 712 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 ZRSR2Q15696 482 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 CLUL1Q15846 466 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 LBX2Q6XYB7 198 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 IRF2BP1Q8IU81 584 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 RSAD2Q8WXG1 361 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 HAUS1Q96CS2 278 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 MS4A14Q96JA4 679 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 ZBTB45Q96K62 511 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 MIS12Q9H081 205 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 ABCB6Q9NP58 842 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 DAAM1Q9Y4D1 1078 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 AFG3L2Q9Y4W6 797 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 CASZ1Q86V15 1759 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 SPDYE5A6NIY4 337 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 PIK3R2O00459 728 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 EPHB6O15197 1021 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 EZRP15311 586 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 CTNNA1P35221 906 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 HIRAP54198 1017 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 CCDC117Q8IWD4 279 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 ATP8B4Q8TF62 1192 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 HVCN1Q96D96 273 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 PACSIN1Q9BY11 444 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 DDX47Q9H0S4 455 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 ZWILCHQ9H900 591 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 BTBD7Q9P203 1132 aa9.95□□□□□ -0.82
TMEM39A-201ENST00000319172 A0A087WZ62 844 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 CCDC151A5D8V7 595 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 KIAA0391O15091 583 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 ARPP19P56211 112 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 C2CD6Q53TS8 623 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 CEP85LQ5SZL2 805 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 RNF187Q5TA31 235 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 ENOSF1Q7L5Y1 443 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 BEST2Q8NFU1 509 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 FDXACB1Q9BRP7 624 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 LRRC4Q9HBW1 653 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 SETD4Q9NVD3 440 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 PRMT7Q9NVM4 692 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 RNF14Q9UBS8 474 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 SNX9Q9Y5X1 595 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 MORC2Q9Y6X9 1032 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 ANKRD63C9JTQ0 380 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 M0QYV0 167 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 ASAP2O43150 1006 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 RWDD2BP57060 319 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 PPP2R5EQ16537 467 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 FIGNQ5HY92 759 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 PPP1R21Q6ZMI0 780 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 SV2AQ7L0J3 742 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 RBBP8NLQ8NC74 664 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 SLC35G2Q8TBE7 412 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 PHF20L1A8MW92 1017 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 ATP2C2O75185 946 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 TBC1D8O95759 1140 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 PSMA2P25787 234 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 CYP2C19P33261 490 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 LAMTOR4Q0VGL1 99 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 NAB2Q15742 525 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 GLRA4Q5JXX5 417 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 PRAMEF19Q5SWL8 479 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 ANO5Q75V66 913 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 DHX38Q92620 1227 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 TEPSINQ96N21 525 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 INPP4AQ96PE3 977 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 MTMR12Q9C0I1 747 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 BCAS3Q9H6U6 928 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 NAGPAQ9UK23 515 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 ZNF214Q9UL59 606 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 SNX12Q9UMY4 172 aa9.94□□□□□ -0.82
TMEM39A-201ENST00000319172 TADA3O75528 432 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 SF3A3Q12874 501 aaKnown RBP eCLIP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 SPOPLQ6IQ16 392 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 RFX6Q8HWS3 928 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 FAM84AQ96KN4 292 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 NFU1Q9UMS0 254 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 CAPN6Q9Y6Q1 641 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 A0A0U1RQJ8 604 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 STRNO43815 780 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 HUS1O60921 280 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 TOM1L1O75674 476 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 SCP2P22307 547 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 AFAP1L1Q8TED9 768 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 PDGFCQ9NRA1 345 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 PCSK1NQ9UHG2 260 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 A8MXQ7 604 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 H7C0C1 242 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 OGTO15294 1046 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 FGFR4P22455 802 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 RGS2P41220 211 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 ATP5OP48047 213 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 PSMC1P62191 440 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 PPP2R5DQ14738 602 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms