RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 HMX2A2RU54 273 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 RIPK2O43353 540 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 AFPP02771 609 aaKnown RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 MAP2K1Q02750 393 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 ALKBH5Q6P6C2 394 aaKnown RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 ANKRD13AQ8IZ07 590 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 SNX29Q8TEQ0 813 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.059e-7■■■■□ 20.1
CNOT4-201ENST00000315544 SLC7A6OSQ96CW6 309 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 FAXDC2Q96IV6 333 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 GORASP1Q9BQQ3 440 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 SLC38A10Q9HBR0 1119 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 APOBEC3GQ9HC16 384 aaKnown RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 MAP3K20Q9NYL2 800 aaKnown RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 RGL1Q9NZL6 768 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 MAGEC2Q9UBF1 373 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 PCDHA12Q9UN75 941 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 A0A087WUV0 522 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 CCDC194A0A1B0GVG4 234 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 BAG3O95817 575 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 BFSP1Q12934 665 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 BNIP1Q12981 228 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 RASA3Q14644 834 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 CDCA2Q69YH5 1023 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 DLK2Q6UY11 383 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 HOMER1Q86YM7 354 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 KSR1Q8IVT5 923 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 ACER1Q8TDN7 264 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 ERP44Q9BS26 406 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 CELF4Q9BZC1 486 aaKnown RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 MYLK2Q9H1R3 596 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 PABPC3Q9H361 631 aaKnown RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 CCDC188H7C350 402 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 RIMBP2O15034 1052 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 HEXIM1O94992 359 aaKnown RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 POLR2FP61218 127 aaKnown RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 SP2Q02086 613 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 PTK6Q13882 451 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 TBC1D10BQ4KMP7 808 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 SFMBT2Q5VUG0 894 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 ZSCAN18Q8TBC5 510 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 LSM14BQ9BX40 385 aaKnown RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 FETUBQ9UGM5 382 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 MYO16Q9Y6X6 1858 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 MACROD2A1Z1Q3 448 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 MAP3K13O43283 966 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 CAND2O75155 1236 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 NMT1P30419 496 aaKnown RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 SEC24CP53992 1094 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 PRMT2P55345 433 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 ASIC1P78348 528 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 DEFB115Q30KQ5 88 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 PLEKHA7Q6IQ23 1121 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 CCDC13Q8IYE1 715 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 GLIS1Q8NBF1 620 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 OR2W6PQ8NHA6 318 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 AZIN2Q96A70 460 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 RTP4Q96DX8 246 aa8.47□□□□□ -1.05
CNOT4-201ENST00000315544 NAP1L4Q99733 375 aaKnown RBP8.47□□□□□ -1.05
CNOT4-201ENST00000315544 XIRP2A4UGR9 3374 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 A0A0B4J269 797 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 TTI1O43156 1089 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 IVLP07476 585 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 UBA7P41226 1012 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 OGDHQ02218 1023 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 CNTN2Q02246 1040 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 TUBB3Q13509 450 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 FILIP1LQ4L180 1135 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 NLRP14Q86W24 1093 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 ERO1BQ86YB8 467 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 SLF2Q8IX21 1173 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 C4orf19Q8IY42 314 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 PDZD7Q9H5P4 517 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 AVENQ9NQS1 362 aaPredicted RBP8.46□□□□□ -1.05
CNOT4-201ENST00000315544 GEMIN8Q9NWZ8 242 aaKnown RBP8.46□□□□□ -1.05
CNOT4-201ENST00000315544 CYTH4Q9UIA0 394 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 PLAAQ9Y263 795 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 MICAL3Q7RTP6 2002 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 DNAH14Q0VDD8 3507 aa8.46□□□□□ -1.05
CNOT4-201ENST00000315544 GOLGA6BA6NDN3 693 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 C6orf229H3BNL8 230 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 BUB1O43683 1085 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 CHKAP35790 457 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 CCT5P48643 541 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 BIRC3Q13489 604 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 EIF4EBP2Q13542 120 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-201ENST00000315544 PKN2Q16513 984 aaKnown RBP8.46□□□□□ -1.06
CNOT4-201ENST00000315544 PKDCCQ504Y2 493 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 C1orf53Q5VUE5 145 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 SHCBP1Q8NEM2 672 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 PARD3BQ8TEW8 1205 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 GTF3C2Q8WUA4 911 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-201ENST00000315544 NOX5Q96PH1 765 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 ARID3AQ99856 593 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 CAPS2Q9BXY5 557 aa8.46□□□□□ -1.06
CNOT4-201ENST00000315544 TRIM7Q9C029 511 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms