RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 EHBP1Q8NDI1 1231 aa24.44■■□□□ 1.5
IRF3-201ENST00000309877 TSEN34Q9BSV6 310 aaKnown RBP24.44■■□□□ 1.5
IRF3-201ENST00000309877 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.44■■□□□ 1.52e-7■■■□□ 14.6
IRF3-201ENST00000309877 CDT1Q9H211 546 aa24.44■■□□□ 1.5
IRF3-201ENST00000309877 PDZD7Q9H5P4 517 aa24.44■■□□□ 1.5
IRF3-201ENST00000309877 SCN10AQ9Y5Y9 1956 aa24.44■■□□□ 1.5
IRF3-201ENST00000309877 MCF2P10911 925 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 TNNI1P19237 187 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 FGFR4P22455 802 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 FECHP22830 423 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 EIF4BP23588 611 aaKnown RBP24.43■■□□□ 1.5
IRF3-201ENST00000309877 BRSK2Q8IWQ3 736 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 C17orf53Q8N3J3 647 aaPredicted RBP24.43■■□□□ 1.5
IRF3-201ENST00000309877 ARRDC4Q8NCT1 418 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 BAP1Q92560 729 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 NUCKS1Q9H1E3 243 aaKnown RBP24.43■■□□□ 1.5
IRF3-201ENST00000309877 PDE11AQ9HCR9 933 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 TOPORSQ9NS56 1045 aaPredicted RBP24.43■■□□□ 1.5
IRF3-201ENST00000309877 M0QZ92 97 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 FAM189A1O60320 539 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 UCHL3P15374 230 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 TNFSF9P41273 254 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 KCNJ6P48051 423 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 CRYBB1P53674 252 aaPredicted RBP24.43■■□□□ 1.5
IRF3-201ENST00000309877 ITGA7Q13683 1181 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 DPY19L2P1Q6NXN4 242 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 PDXDC1Q6P996 788 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 GLT1D1Q96MS3 346 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 ADPGKQ9BRR6 497 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 SIX2Q9NPC8 291 aa24.43■■□□□ 1.5
IRF3-201ENST00000309877 CPSF3Q9UKF6 684 aaKnown RBP24.43■■□□□ 1.5
IRF3-201ENST00000309877 GRIN2DO15399 1336 aa24.42■■□□□ 1.5
IRF3-201ENST00000309877 PCNTO95613 3336 aa24.42■■□□□ 1.5
IRF3-201ENST00000309877 LRRC53A6NM62 1247 aa24.42■■□□□ 1.5
IRF3-201ENST00000309877 ZNF500O60304 480 aaPredicted RBP24.42■■□□□ 1.5
IRF3-201ENST00000309877 FBXL5Q9UKA1 691 aa24.42■■□□□ 1.5
IRF3-201ENST00000309877 SOWAHDA6NJG2 315 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 RPLP2P05387 115 aaKnown RBP24.41■■□□□ 1.5
IRF3-201ENST00000309877 OSTNP61366 133 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 CLDN10P78369 228 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 SNX17Q15036 470 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 SURF1Q15526 300 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 PTGISQ16647 500 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 EPC2Q52LR7 807 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 APBB1IPQ7Z5R6 666 aaPredicted RBP24.41■■□□□ 1.5
IRF3-201ENST00000309877 SERINC5Q86VE9 423 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 FAM212AQ96EL1 285 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 SPAG5Q96R06 1193 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 CELF4Q9BZC1 486 aaKnown RBP24.41■■□□□ 1.5
IRF3-201ENST00000309877 PLAGL2Q9UPG8 496 aa24.41■■□□□ 1.5
IRF3-201ENST00000309877 A0A1B0GUA9 196 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 MRPS6P82932 125 aaKnown RBP24.4■■□□□ 1.5
IRF3-201ENST00000309877 PTPN11Q06124 597 aaPredicted RBP24.4■■□□□ 1.5
IRF3-201ENST00000309877 MEA1Q16626 185 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 KYAT1Q16773 422 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 SLC9C1Q4G0N8 1177 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 SV2AQ7L0J3 742 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 CGRRF1Q99675 332 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 UNC93B1Q9H1C4 597 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 DAAM1Q9Y4D1 1078 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 FHOD1Q9Y613 1164 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 HNRNPH3P31942 346 aaKnown RBP24.4■■□□□ 1.5
IRF3-201ENST00000309877 WNT7BP56706 349 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 SFMBT2Q5VUG0 894 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 LMBRD2Q68DH5 695 aaPredicted RBP24.4■■□□□ 1.5
IRF3-201ENST00000309877 WDR59Q6PJI9 974 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 FBXL13Q8NEE6 735 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 LMO3Q8TAP4 145 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 RPF1Q9H9Y2 349 aaKnown RBP24.4■■□□□ 1.5
IRF3-201ENST00000309877 APEX2Q9UBZ4 518 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 NOD1Q9Y239 953 aa24.4■■□□□ 1.5
IRF3-201ENST00000309877 RAPGEF1Q13905 1077 aa24.39■■□□□ 1.49
IRF3-201ENST00000309877 IQCEQ6IPM2 695 aa24.39■■□□□ 1.49
IRF3-201ENST00000309877 CEP120Q8N960 986 aa24.39■■□□□ 1.49
IRF3-201ENST00000309877 ZNF516Q92618 1163 aa24.39■■□□□ 1.49
IRF3-201ENST00000309877 SYN2Q92777 582 aaPredicted RBP24.39■■□□□ 1.49
IRF3-201ENST00000309877 CHP1Q99653 195 aa24.39■■□□□ 1.49
IRF3-201ENST00000309877 COQ4Q9Y3A0 265 aa24.39■■□□□ 1.49
IRF3-201ENST00000309877 TRPV2Q9Y5S1 764 aa24.39■■□□□ 1.49
IRF3-201ENST00000309877 KBTBD13C9JR72 458 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 CLTAP09496 248 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 STAG3L1P0CL83 205 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 AXLP30530 894 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 AP3M2P53677 418 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 DCAF4L1Q3SXM0 396 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 NOTUMQ6P988 496 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 GJB7Q6PEY0 223 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 RAD9BQ6WBX8 426 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 TMEM40Q8WWA1 233 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 RAB20Q9NX57 234 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 DNAJC12Q9UKB3 198 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 MYO6Q9UM54 1294 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 CDY2AQ9Y6F7 541 aa24.38■■□□□ 1.49
IRF3-201ENST00000309877 TRIP12Q14669 1992 aaPredicted RBP24.38■■□□□ 1.49
IRF3-201ENST00000309877 MYCP01106 439 aaPredicted RBP24.37■■□□□ 1.49
IRF3-201ENST00000309877 RFX1P22670 979 aa24.37■■□□□ 1.49
IRF3-201ENST00000309877 HOXA11P31270 313 aaPredicted RBP24.37■■□□□ 1.49
IRF3-201ENST00000309877 CDK17Q00537 523 aa24.37■■□□□ 1.49
IRF3-201ENST00000309877 BIRC3Q13489 604 aa24.37■■□□□ 1.49
IRF3-201ENST00000309877 MTF1Q14872 753 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms