RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 SEPT11Q9NVA2 429 aaKnown RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 HAO1Q9UJM8 370 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 ATP6V0A2Q9Y487 856 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 WDR91A4D1P6 747 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 CAPN9O14815 690 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 CIB2O75838 187 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 KLRC1P26715 233 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 SCNN1DP51172 638 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 KLHDC7AQ5VTJ3 777 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 THOC7Q6I9Y2 204 aaKnown RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 LRRC8BQ6P9F7 803 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 SCUBE1Q8IWY4 988 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 IQCKQ8N0W5 287 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 FAM129AQ9BZQ8 928 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 NUB1Q9Y5A7 615 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 POTECB2RU33 542 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 DAPK3O43293 454 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 NT5C2P49902 561 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 COASYQ13057 564 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 ITIH4Q14624 930 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 INAQ16352 499 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 MTMR9Q96QG7 549 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 CNGB3Q9NQW8 809 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 MTRF1LQ9UGC7 380 aaKnown RBP11.15□□□□□ -0.62
MSRB3-201ENST00000308259 DOLKQ9UPQ8 538 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 ARL2BPQ9Y2Y0 163 aa11.15□□□□□ -0.62
MSRB3-201ENST00000308259 ENTPD5O75356 428 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 KRT18P05783 430 aaKnown RBP11.15□□□□□ -0.63
MSRB3-201ENST00000308259 HERC4Q5GLZ8 1057 aaPredicted RBP11.15□□□□□ -0.63
MSRB3-201ENST00000308259 FAM83BQ5T0W9 1011 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 PDXDC1Q6P996 788 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 POTEEQ6S8J3 1075 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 SCG3Q8WXD2 468 aaKnown RBP11.15□□□□□ -0.63
MSRB3-201ENST00000308259 ANKS1AQ92625 1134 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 IKZF4Q9H2S9 585 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 CD209Q9NNX6 404 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 USP40Q9NVE5 1235 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 DDX25Q9UHL0 483 aaKnown RBP11.15□□□□□ -0.63
MSRB3-201ENST00000308259 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.63
MSRB3-201ENST00000308259 USP17L10C9JJH3 530 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 RAD51CO43502 376 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 TRPA1O75762 1119 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 MYOCDQ8IZQ8 938 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 NEDD1Q8NHV4 660 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 ANKRD27Q96NW4 1050 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 CUEDC2Q9H467 287 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 RBMX2Q9Y388 322 aaKnown RBP11.14□□□□□ -0.63
MSRB3-201ENST00000308259 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 SLC26A4O43511 780 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 LMNAP02545 664 aaKnown RBP11.14□□□□□ -0.63
MSRB3-201ENST00000308259 CACNB3P54284 484 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 HGSNATQ68CP4 663 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 LRRC37BQ96QE4 947 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 SH3GL1Q99961 368 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 CNOT8Q9UFF9 292 aaKnown RBP11.14□□□□□ -0.63
MSRB3-201ENST00000308259 PHF24Q9UPV7 400 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 SNED1Q8TER0 1413 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 A0A087X0T9 212 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 FAM228BP0C875 321 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 ACADSP16219 412 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 ITGA7Q13683 1181 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 SUPT20HL1Q3ZLR7 823 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 C14orf80Q86SX3 495 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 ERLEC1Q96DZ1 483 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 FMO2Q99518 471 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 FAM192AQ9GZU8 254 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 SUGT1Q9Y2Z0 365 aa11.14□□□□□ -0.63
MSRB3-201ENST00000308259 A0A1W2PQJ5 194 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 NOL4O94818 638 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 KCNA2P16389 499 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 ZNF844Q08AG5 666 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 ADGRF4Q8IZF3 695 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 TSG101Q99816 390 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 FAM26FQ5R3K3 315 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 PPP1R21Q6ZMI0 780 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
MSRB3-201ENST00000308259 HAS1Q92839 578 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 DKK3Q9UBP4 350 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 TBK1Q9UHD2 729 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 POTEFA5A3E0 1075 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 BOLA2-SMG1P6H3BVE0 249 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 YY1P25490 414 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 CASP5P51878 434 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 CNPY1Q3B7I2 92 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 CCDC62Q6P9F0 684 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 POTEGQ6S5H5 508 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 CCDC84Q86UT8 332 aaPredicted RBP11.13□□□□□ -0.63
MSRB3-201ENST00000308259 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms