RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ERLIN2O94905 339 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
SMIM4-201ENST00000307106 PABPC1LQ4VXU2 614 aaKnown RBP13.22□□□□□ -0.29
SMIM4-201ENST00000307106 PLA2G4FQ68DD2 849 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 RABGGTAQ92696 567 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 CLSTN3Q9BQT9 956 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 APOL6Q9BWW8 343 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 KCNH3Q9ULD8 1083 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 NUP205Q92621 2012 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMIM4-201ENST00000307106 HRO43593 1189 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 TADA2AO75478 443 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 LIMK1P53667 647 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 SATB1Q01826 763 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 SRSF5Q13243 272 aaKnown RBP13.21□□□□□ -0.29
SMIM4-201ENST00000307106 AASDHQ4L235 1098 aaPredicted RBP13.21□□□□□ -0.29
SMIM4-201ENST00000307106 ANO5Q75V66 913 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 SLC7A14Q8TBB6 771 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
SMIM4-201ENST00000307106 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.29
SMIM4-201ENST00000307106 SLC7A3Q8WY07 619 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 MCRS1Q96EZ8 462 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 LMAN1LQ9HAT1 526 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 DNMT3BQ9UBC3 853 aaKnown RBP13.21□□□□□ -0.29
SMIM4-201ENST00000307106 BRPF3Q9ULD4 1205 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 ZMIZ1Q9ULJ6 1067 aa13.21□□□□□ -0.29
SMIM4-201ENST00000307106 MRPS23Q9Y3D9 190 aaKnown RBP13.21□□□□□ -0.29
SMIM4-201ENST00000307106 SPEGQ15772 3267 aa13.21□□□□□ -0.3
SMIM4-201ENST00000307106 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 CHURC1-FNTBB4DL54 471 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 TM4SF5O14894 197 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 SLC27A2O14975 620 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 EDIL3O43854 480 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 PSMD10O75832 226 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 POU2F2P09086 479 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 GNA11P29992 359 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 CDC27P30260 824 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 CNR2P34972 360 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 CXCL12P48061 93 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 FNTBP49356 437 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 LAMTOR4Q0VGL1 99 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 GRIK3Q13003 919 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 AAMPQ13685 434 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 PSMD5Q16401 504 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 AXDND1Q5T1B0 1012 aaPredicted RBP13.2□□□□□ -0.3
SMIM4-201ENST00000307106 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
SMIM4-201ENST00000307106 TANGO2Q6ICL3 276 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 NOTUMQ6P988 496 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 CEP57Q86XR8 500 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 GSTCDQ8NEC7 633 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
SMIM4-201ENST00000307106 PRPF31Q8WWY3 499 aaKnown RBP13.2□□□□□ -0.3
SMIM4-201ENST00000307106 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 FAM3CQ92520 227 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 ELSPBP1Q96BH3 223 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 TTPALQ9BTX7 342 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 BRD9Q9H8M2 597 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 CACNG4Q9UBN1 327 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
SMIM4-201ENST00000307106 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 ADAM12O43184 909 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 TSPAN1O60635 241 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 C1QTNF9P0C862 333 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 AXLP30530 894 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 NPEPPSP55786 919 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 GRM2Q14416 872 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-201ENST00000307106 FAM171A1Q5VUB5 890 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 B3GNT9Q6UX72 402 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 UNQ6494/PRO21346Q6UXR6 183 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-201ENST00000307106 C12orf50Q8NA57 414 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-201ENST00000307106 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 CCDC51Q96ER9 411 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-201ENST00000307106 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 NXF3Q9H4D5 531 aaKnown RBP13.19□□□□□ -0.3
SMIM4-201ENST00000307106 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-201ENST00000307106 GDE1Q9NZC3 331 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 WDFY3Q8IZQ1 3526 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
SMIM4-201ENST00000307106 RHOP08100 348 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 AKAP5P24588 427 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 USP11P51784 963 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 PSMC5P62195 406 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 GAS6Q14393 721 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 SF3A2Q15428 464 aaKnown RBP13.18□□□□□ -0.3
SMIM4-201ENST00000307106 SLC5A9Q2M3M2 681 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 POTEHQ6S545 545 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms