RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 SEZ6Q53EL9 994 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TAPT1Q6NXT6 567 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ARMCX2Q7L311 632 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 FMNL3Q8IVF7 1028 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 RPUSD2Q8IZ73 545 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 ATP8B4Q8TF62 1192 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 MPHOSPH6Q99547 160 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 HINFPQ9BQA5 517 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 LRRC1Q9BTT6 524 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ST7Q9NRC1 585 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 RBM12Q9NTZ6 932 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 L1RE1Q9UN81 338 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TARSL2A2RTX5 802 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 NOP56O00567 594 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 MAP2K7O14733 419 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ATP8B1O43520 1251 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 VNN1O95497 513 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 C4BPAP04003 597 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 GJB1P08034 283 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 SCP2P22307 547 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ADORA2AP29274 412 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 USP8P40818 1118 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 MFAP3P55082 362 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 LAMTOR4Q0VGL1 99 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ZACNQ401N2 412 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TDRD10Q5VZ19 366 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 VTI1AQ96AJ9 217 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 FAM167AQ96KS9 214 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 UBXN6Q9BZV1 441 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ISCUQ9H1K1 167 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 KIAA1586Q9HCI6 787 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ANKFY1Q9P2R3 1169 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 CNTNAP2Q9UHC6 1331 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 CCL15-CCL14A0A0B4J2E2 113 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 GRIN3BO60391 1043 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 KIF4AO95239 1232 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 CALCAP01258 141 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 MYBL2P10244 700 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 CETPP11597 493 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 MATR3P43243 847 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP47-201ENST00000305481 ARHGAP1Q07960 439 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 CCL15Q16663 113 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 CDCA2Q69YH5 1023 aaPredicted RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 NT5DC3Q86UY8 548 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 KRT222Q8N1A0 295 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 RFFLQ8WZ73 363 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 DDX1Q92499 740 aaKnown RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 NT5C1BQ96P26 610 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 KATNBL1Q9H079 304 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 RNPEPQ9H4A4 650 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 SEPT11Q9NVA2 429 aaKnown RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 ZHX1Q9UKY1 873 aaPredicted RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 PNMA3Q9UL41 463 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 DIS3Q9Y2L1 958 aaKnown RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 ANKRD62A6NC57 917 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 UNCXA6NJT0 531 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 ABLIM1O14639 778 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 FTLP02792 175 aaPredicted RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 MMEP08473 750 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 FMO1Q01740 532 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 CFAP221Q4G0U5 840 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 TAF3Q5VWG9 929 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 IER5Q5VY09 327 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 SLFN12LQ6IEE8 588 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 USP37Q86T82 979 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 PTPN18Q99952 460 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 MSTO1Q9BUK6 570 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 DMGDHQ9UI17 866 aaKnown RBP7.06□□□□□ -1.28
USP47-201ENST00000305481 SLC45A1Q9Y2W3 748 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 PPME1Q9Y570 386 aa7.06□□□□□ -1.28
USP47-201ENST00000305481 LOC102724159A0A0B4J2E5 919 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 ASB14A6NK59 587 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 KCNK3O14649 394 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 CYP11B1P15538 503 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 TNFSF9P41273 254 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 GTF2A2P52657 109 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 RNASE9P60153 205 aaKnown RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 TTLL4Q14679 1199 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 PWP2Q15269 919 aaKnown RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 RPS6KA1Q15418 735 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 IFI16Q16666 785 aaKnown RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 SPOPLQ6IQ16 392 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 DAAM2Q86T65 1068 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 METTL13Q8N6R0 699 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 SCFD2Q8WU76 684 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 CTNNBL1Q8WYA6 563 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 HES6Q96HZ4 224 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 ZNF668Q96K58 619 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 SMARCAD1Q9H4L7 1026 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 RBAKQ9NYW8 714 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 RNF14Q9UBS8 474 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 MORF4L1Q9UBU8 362 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 CHORDC1Q9UHD1 332 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 CENPFP49454 3210 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 CES2O00748 559 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 KIAA0391O15091 583 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms