RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PSMA7O14818 248 aa26.69■■□□□ 1.86
HOXC9-201ENST00000303450 KIAA0391O15091 583 aaKnown RBP26.69■■□□□ 1.86
HOXC9-201ENST00000303450 OFD1O75665 1012 aa26.69■■□□□ 1.86
HOXC9-201ENST00000303450 LDHAP00338 332 aaKnown RBP26.69■■□□□ 1.86
HOXC9-201ENST00000303450 LRIT3Q3SXY7 679 aa26.69■■□□□ 1.86
HOXC9-201ENST00000303450 PAN2Q504Q3 1202 aaKnown RBP26.69■■□□□ 1.86
HOXC9-201ENST00000303450 NOC3LQ8WTT2 800 aaKnown RBP26.69■■□□□ 1.86
HOXC9-201ENST00000303450 SAAL1Q96ER3 474 aa26.69■■□□□ 1.86
HOXC9-201ENST00000303450 GAD1Q99259 594 aa26.69■■□□□ 1.86
HOXC9-201ENST00000303450 HSPBP1Q9NZL4 362 aa26.69■■□□□ 1.86
HOXC9-201ENST00000303450 PCDHA11Q9Y5I1 949 aa26.69■■□□□ 1.86
HOXC9-201ENST00000303450 ARL5CA6NH57 179 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 FAM189A1O60320 539 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 CD44P16070 742 aaKnown RBP26.68■■□□□ 1.86
HOXC9-201ENST00000303450 MLH1P40692 756 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 TNFSF9P41273 254 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 ACOT2P49753 483 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 BTG3Q14201 252 aaPredicted RBP26.68■■□□□ 1.86
HOXC9-201ENST00000303450 RAB30Q15771 203 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 ZBTB41Q5SVQ8 909 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 KLHL10Q6JEL2 608 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 URGCPQ8TCY9 931 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 RSPH1Q8WYR4 309 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 DHTKD1Q96HY7 919 aaPredicted RBP26.68■■□□□ 1.86
HOXC9-201ENST00000303450 CASD1Q96PB1 797 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 FAM213AQ9BRX8 229 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 PBX4Q9BYU1 374 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 SEMA6BQ9H3T3 888 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 RC3H2Q9HBD1 1191 aaKnown RBP26.68■■□□□ 1.86
HOXC9-201ENST00000303450 MSRAQ9UJ68 235 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 TRAF3IP3Q9Y228 551 aa26.68■■□□□ 1.86
HOXC9-201ENST00000303450 FNDC1Q4ZHG4 1894 aaPredicted RBP26.68■■□□□ 1.86
HOXC9-201ENST00000303450 LAMA2P24043 3122 aaKnown RBP26.67■■□□□ 1.86
HOXC9-201ENST00000303450 PPP1R3GB7ZBB8 358 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 CYP2J2P51589 502 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 SMAD3P84022 425 aaKnown RBP26.67■■□□□ 1.86
HOXC9-201ENST00000303450 NOMO2Q5JPE7 1267 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 SASS6Q6UVJ0 657 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 C12orf56Q8IXR9 622 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 CMTR2Q8IYT2 770 aaKnown RBP26.67■■□□□ 1.86
HOXC9-201ENST00000303450 ZFP42Q96MM3 310 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 RPS6KC1Q96S38 1066 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 RPF1Q9H9Y2 349 aaKnown RBP26.67■■□□□ 1.86
HOXC9-201ENST00000303450 GBF1Q92538 1859 aa26.67■■□□□ 1.86
HOXC9-201ENST00000303450 CITO14578 2027 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 GOLGA8IPA6NC78 632 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 GOLGA8JA6NMD2 632 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 EXTL3O43909 919 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 MYOGP15173 224 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 PBX2P40425 430 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 NLRP12P59046 1061 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 CENPPQ6IPU0 288 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 GPD1LQ8N335 351 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 MLKLQ8NB16 471 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 TSG101Q99816 390 aa26.66■■□□□ 1.86
HOXC9-201ENST00000303450 MRPL9Q9BYD2 267 aaKnown RBP26.66■■□□□ 1.86
HOXC9-201ENST00000303450 CPSF3Q9UKF6 684 aaKnown RBP26.66■■□□□ 1.86
HOXC9-201ENST00000303450 NR3C1P04150 777 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 CXCL8P10145 99 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 XXYLT1Q8NBI6 393 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 ZSWIM2Q8NEG5 633 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 P2RX5Q93086 422 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 KIAA1586Q9HCI6 787 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 KANSL3Q9P2N6 904 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 LCHNA4D1U4 455 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 CCNE1P24864 410 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 AFF1P51825 1210 aaKnown RBP26.65■■□□□ 1.86
HOXC9-201ENST00000303450 HSP90AA2PQ14568 343 aaPredicted RBP26.65■■□□□ 1.86
HOXC9-201ENST00000303450 ZCWPW2Q504Y3 356 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 CRELD2Q6UXH1 353 aaPredicted RBP26.65■■□□□ 1.86
HOXC9-201ENST00000303450 LRRC43Q8N309 656 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 FIBCD1Q8N539 461 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 NELFBQ8WX92 580 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 SNX27Q96L92 541 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 CTNND2Q9UQB3 1225 aa26.65■■□□□ 1.86
HOXC9-201ENST00000303450 LAMA3Q16787 3333 aa26.64■■□□□ 1.86
HOXC9-201ENST00000303450 INPPL1O15357 1258 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 EXOC3O60645 756 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 POMCP01189 267 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 CA3P07451 260 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 RPL13P26373 211 aaKnown RBP26.64■■□□□ 1.85
HOXC9-201ENST00000303450 SCNN1GP51170 649 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 RNASELQ05823 741 aaKnown RBP26.64■■□□□ 1.85
HOXC9-201ENST00000303450 ENOX2Q16206 610 aaKnown RBP26.64■■□□□ 1.85
HOXC9-201ENST00000303450 EDRF1Q3B7T1 1238 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 SLC10A6Q3KNW5 377 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 SLC9A9Q8IVB4 645 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 SP7Q8TDD2 431 aaPredicted RBP26.64■■□□□ 1.85
HOXC9-201ENST00000303450 FAM212AQ96EL1 285 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 PLEKHA5Q9HAU0 1116 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 TBC1D13Q9NVG8 400 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 DACH1Q9UI36 760 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 YBX2Q9Y2T7 364 aaKnown RBP26.64■■□□□ 1.85
HOXC9-201ENST00000303450 TRIP11Q15643 1979 aa26.64■■□□□ 1.85
HOXC9-201ENST00000303450 COL4A6Q14031 1691 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 LETM1O95202 739 aaPredicted RBP26.63■■□□□ 1.85
HOXC9-201ENST00000303450 NR2F2P24468 414 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 LRRC63Q05C16 580 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 PPP2R3AQ06190 1150 aa26.63■■□□□ 1.85
HOXC9-201ENST00000303450 PAK1Q13153 545 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms