RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 AP3M2P53677 418 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 C2orf54Q08AI8 447 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 LAMC2Q13753 1193 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 WDR78Q5VTH9 848 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 ARMCX2Q7L311 632 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 PRPF31Q8WWY3 499 aaKnown RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 KAT5Q92993 513 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 EMID1Q96A84 441 aaPredicted RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 POP1Q99575 1024 aaKnown RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 CGRRF1Q99675 332 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 MSTO1Q9BUK6 570 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 TARS2Q9BW92 718 aaKnown RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 MRPL4Q9BYD3 311 aaKnown RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 CCL15-CCL14A0A0B4J2E2 113 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 ASAP2O43150 1006 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 DLATP10515 647 aaKnown RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 NLRP11P59045 1033 aaKnown RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 CCL15Q16663 113 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 RPUSD2Q8IZ73 545 aaKnown RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 ZNF516Q92618 1163 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 SELENOOQ9BVL4 669 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 HAPLN2Q9GZV7 340 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 RBAKQ9NYW8 714 aaPredicted RBP20.94■□□□□ 0.94
HOXC4-201ENST00000303406 L1RE1Q9UN81 338 aa20.94■□□□□ 0.94
HOXC4-201ENST00000303406 BTBD19C9JJ37 291 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 MSCO60682 206 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 MTA2O94776 668 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 ZBTB48P10074 688 aaPredicted RBP20.93■□□□□ 0.94
HOXC4-201ENST00000303406 CHRNB2P17787 502 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 LAMTOR4Q0VGL1 99 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 TFDP1Q14186 410 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 HDXQ7Z353 690 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 PEX26Q7Z412 305 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 BRSK2Q8IWQ3 736 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 ACTRT1Q8TDG2 376 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 SLC20A1Q8WUM9 679 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 C1orf112Q9NSG2 853 aa20.93■□□□□ 0.94
HOXC4-201ENST00000303406 TOM1L1O75674 476 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 SGPL1O95470 568 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 CXCR5P32302 372 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 PDE6CP51160 858 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 CDR2Q01850 454 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 POU5F1BQ06416 359 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 ARHGAP1Q07960 439 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 MKRN4PQ13434 485 aaPredicted RBP20.92■□□□□ 0.94
HOXC4-201ENST00000303406 SURF1Q15526 300 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 WDR44Q5JSH3 913 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 ZNF484Q5JVG2 852 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 TAPT1Q6NXT6 567 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 MAMDC4Q6UXC1 1216 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 NOP9Q86U38 636 aaKnown RBP20.92■□□□□ 0.94
HOXC4-201ENST00000303406 NT5DC3Q86UY8 548 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 ZNF677Q86XU0 584 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 SLC35G2Q8TBE7 412 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 BRI3BPQ8WY22 251 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 HES6Q96HZ4 224 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 NFKBIZQ9BYH8 718 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 UBXN6Q9BZV1 441 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 GBA2Q9HCG7 927 aaPredicted RBP20.92■□□□□ 0.94
HOXC4-201ENST00000303406 ERAP1Q9NZ08 941 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 AMFRQ9UKV5 643 aa20.92■□□□□ 0.94
HOXC4-201ENST00000303406 MCM3APO60318 1980 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 ZNF236Q9UL36 1845 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 SASH3O75995 380 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 GH1P01241 217 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 EDN1P05305 212 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 CYP11B1P15538 503 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 TNNI1P19237 187 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 TNFRSF8P28908 595 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 ADORA2AP29274 412 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 PLA2G4AP47712 749 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 GPC5P78333 572 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 CBX1P83916 185 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 DRP2Q13474 957 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 MAP1SQ66K74 1059 aaPredicted RBP20.91■□□□□ 0.94
HOXC4-201ENST00000303406 PSMB7Q99436 277 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 ARID3AQ99856 593 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 SEPT11Q9NVA2 429 aaKnown RBP20.91■□□□□ 0.94
HOXC4-201ENST00000303406 CNTNAP2Q9UHC6 1331 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 COL1A2P08123 1366 aa20.91■□□□□ 0.94
HOXC4-201ENST00000303406 CLDN3O15551 220 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 CYP26A1O43174 497 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 HLA-DRAP01903 254 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 FTLP02792 175 aaPredicted RBP20.9■□□□□ 0.94
HOXC4-201ENST00000303406 PRKCBP05771 671 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 USP8P40818 1118 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 BPIFB4P59827 614 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 FMO1Q01740 532 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 MAPK6Q16659 721 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 TDRD10Q5VZ19 366 aaKnown RBP20.9■□□□□ 0.94
HOXC4-201ENST00000303406 C11orf63Q6NUN7 778 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 DAAM2Q86T65 1068 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 TRIM50Q86XT4 487 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 PALB2Q86YC2 1186 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 RASGEF1CQ8N431 466 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 COPS5Q92905 334 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 ZBTB45Q96K62 511 aaPredicted RBP20.9■□□□□ 0.94
HOXC4-201ENST00000303406 PARK7Q99497 189 aaKnown RBP20.9■□□□□ 0.94
HOXC4-201ENST00000303406 ACO2Q99798 780 aaKnown RBP20.9■□□□□ 0.94
HOXC4-201ENST00000303406 TAS2R14Q9NYV8 317 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms