RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 SENP7Q9BQF6 1050 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 ATP11BQ9Y2G3 1177 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 STRNO43815 780 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 ORC4O43929 436 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 SIK1P57059 783 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 PROSER3Q2NL68 480 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 KBTBD12Q3ZCT8 623 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 DPP9Q86TI2 863 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 KIAA0825Q8IV33 1275 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 PPM1NQ8N819 430 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 ULK4Q96C45 1275 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 DDX47Q9H0S4 455 aaKnown RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 VPS11Q9H270 941 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 VSNL1P62760 191 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CACNB1Q02641 598 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 PIGHQ14442 188 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 TTC39BQ5VTQ0 682 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 MMGT1Q8N4V1 131 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 OSBPL8Q9BZF1 889 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 PNPLA7Q6ZV29 1317 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 TRIM49BA6NDI0 452 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 VHLP40337 213 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CARSP49589 748 aaKnown RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 BCAR1P56945 870 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 EDRF1Q3B7T1 1238 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 KDM7AQ6ZMT4 941 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CYFIP1Q7L576 1253 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 NGRNQ9NPE2 291 aaKnown RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 LRFN2Q9ULH4 789 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 PLEKHA8P1O95397 391 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CCZ1BP86790 482 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CCZ1P86791 482 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 TSPY1Q01534 308 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 C7orf25Q9BPX7 421 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 UTYO14607 1347 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 SERPINB1P30740 379 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 KRT72Q14CN4 511 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 MAPK6Q16659 721 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CDO1Q16878 200 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 GPD1LQ8N335 351 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 MRPL4Q9BYD3 311 aaKnown RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CCSER1Q9C0I3 900 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 KDM6AO15550 1401 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 SRGNP10124 158 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 CTTNQ14247 550 aaKnown RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 TRAPPC11Q7Z392 1133 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 PUS3Q9BZE2 481 aaKnown RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 COA1Q9GZY4 146 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 KCNQ3O43525 872 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 WDR47O94967 919 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 FGFR4P22455 802 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 TYK2P29597 1187 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 MRPS25P82663 173 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ASAP3Q8TDY4 903 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 EXT2Q93063 718 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 RMDN1Q96DB5 314 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 EPS8L2Q9H6S3 715 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 USP27XA6NNY8 438 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 FDX1P10109 184 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 TMED10P49755 219 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 EFNA5P52803 228 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 NSUN2Q08J23 767 aaKnown RBP eCLIP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 NR1I3Q14994 352 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ZBTB33Q86T24 672 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 SPICE1Q8N0Z3 855 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 CCNYL1Q8N7R7 359 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 EME1Q96AY2 570 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 COA7Q96BR5 231 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 XPO6Q96QU8 1125 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 GEMIN8Q9NWZ8 242 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 LMCD1Q9NZU5 365 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 APEX2Q9UBZ4 518 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 FAM170AA1A519 330 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 C4BPBP20851 252 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 MTERF2Q49AM1 385 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 WLSQ5T9L3 541 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 FAR2Q96K12 515 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ITGB1BP2Q9UKP3 347 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 A0A087WWV3 80 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 KRT75O95678 551 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ALDH18A1P54886 795 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 FASTKD1Q53R41 847 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF677Q86XU0 584 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ARHGEF26Q96DR7 871 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 FAM167BQ9BTA0 163 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 APOL6Q9BWW8 343 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 OLFML3Q9NRN5 406 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 GIMAP4Q9NUV9 329 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 HUS1O60921 280 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 SLC4A1P02730 911 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ILF2Q12905 390 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 SERPINB12Q96P63 405 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 AGPAT1Q99943 283 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 DDX50Q9BQ39 737 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 HACD3Q9P035 362 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 HEY1Q9Y5J3 304 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms