RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 KRT35Q92764 455 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 KIFAP3Q92845 792 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 ACSF2Q96CM8 615 aaPredicted RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 RNPC3Q96LT9 517 aaKnown RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 PPANQ9NQ55 473 aaKnown RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 TARSL2A2RTX5 802 aaKnown RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 GOLGA8SH3BPF8 625 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 THAP12O43422 761 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 CYP2C8P10632 490 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 COMTP21964 271 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 EPHB4P54760 987 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 TMEM62Q0P6H9 643 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 PDCLQ13371 301 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 GPR162Q16538 588 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 HP1BP3Q5SSJ5 553 aaPredicted RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 SEL1L2Q5TEA6 688 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 FBXO16Q8IX29 292 aaPredicted RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 C4orf19Q8IY42 314 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 USP38Q8NB14 1042 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 FAM71BQ8TC56 605 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 HAUS1Q96CS2 278 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 KLRG1Q96E93 195 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 STRA6Q9BX79 667 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 RBAKQ9NYW8 714 aaPredicted RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 GPRC5DQ9NZD1 345 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 SPDYE16A6NNV3 312 aaPredicted RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 CLDN3O15551 220 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 OPA1O60313 960 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 WEE2P0C1S8 567 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 RPS12P25398 132 aaKnown RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 ADSSP30520 456 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 MAPK4P31152 587 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 NLRP11P59045 1033 aaKnown RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 GPC5P78333 572 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 FOXR1Q6PIV2 292 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 GSTA5Q7RTV2 222 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 NOP9Q86U38 636 aaKnown RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 UBL4BQ8N7F7 174 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 TMEM161BQ8NDZ6 487 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 OLIG1Q8TAK6 271 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 RFFLQ8WZ73 363 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 BORCS6Q96GS4 357 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 ADAM33Q9BZ11 813 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 TRIM7Q9C029 511 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 ASIC3Q9UHC3 531 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 DGAT1O75907 488 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 ATF7P17544 494 aaPredicted RBP9.99□□□□□ -0.81
PRDM9-201ENST00000296682 TCF7P36402 384 aaPredicted RBP9.99□□□□□ -0.81
PRDM9-201ENST00000296682 NNTQ13423 1086 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 PPP2R5AQ15172 486 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 Q3C1V9 767 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 KRT71Q3SY84 523 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 GPD1LQ8N335 351 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 MCPH1Q8NEM0 835 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 FIZ1Q96SL8 496 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 NRBP2Q9NSY0 501 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.99□□□□□ -0.81
PRDM9-201ENST00000296682 ZNF214Q9UL59 606 aaPredicted RBP9.99□□□□□ -0.81
PRDM9-201ENST00000296682 DAAM1Q9Y4D1 1078 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 COL11A1P12107 1806 aaPredicted RBP9.99□□□□□ -0.81
PRDM9-201ENST00000296682 PI4K2BG5E9Z4 385 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 POTEJP0CG39 1038 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 TNFRSF8P28908 595 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 NSFP46459 744 aaKnown RBP9.99□□□□□ -0.81
PRDM9-201ENST00000296682 PARD3BQ8TEW8 1205 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 ZIM3Q96PE6 472 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.99□□□□□ -0.81
PRDM9-201ENST00000296682 MKNK1Q9BUB5 465 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 APOL6Q9BWW8 343 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 MAF1Q9H063 256 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 PFASO15067 1338 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 ADGRA3Q8IWK6 1321 aa9.99□□□□□ -0.81
PRDM9-201ENST00000296682 MYO1FO00160 1098 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 DKC1O60832 514 aaKnown RBP eCLIP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 XKR3Q5GH77 459 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 TMEM63BQ5T3F8 832 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 DCUN1D2Q6PH85 259 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 MMGT1Q8N4V1 131 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 ZNF564Q8TBZ8 553 aaPredicted RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 PRPF31Q8WWY3 499 aaKnown RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 RNF25Q96BH1 459 aaPredicted RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 SPATA33Q96N06 139 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 SELENOSQ9BQE4 189 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 PLAAQ9Y263 795 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CENPFP49454 3210 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 C19orf81C9J6K1 198 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 IFNB1P01574 187 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 ANXA13P27216 316 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CCT5P48643 541 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CLCN3P51790 818 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CATSPERGQ6ZRH7 1159 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 BCAS4Q8TDM0 211 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CDHR1Q96JP9 859 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 PCDHB18PQ96TA0 734 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 FHDC1Q9C0D6 1143 aaPredicted RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 PSD3Q9NYI0 1048 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 BTBD7Q9P203 1132 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms