RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 RNF169Q8NCN4 708 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 LPPQ93052 612 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 FAM84AQ96KN4 292 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 FAM105AQ9NUU6 356 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 FRMD4BQ9Y2L6 1034 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 IPPQ9Y573 584 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 PARNO95453 639 aaKnown RBP16.49■□□□□ 0.23
CCDC140-201ENST00000295226 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
CCDC140-201ENST00000295226 EPHB4P54760 987 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 DCAF4L1Q3SXM0 396 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 CDKAL1Q5VV42 579 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 FOXR2Q6PJQ5 311 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 PLEKHO2Q8TD55 490 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
CCDC140-201ENST00000295226 FBXL18Q96ME1 805 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 THAP9Q9H5L6 903 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 RGS18Q9NS28 235 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 KLK14Q9P0G3 267 aa16.49■□□□□ 0.23
CCDC140-201ENST00000295226 KCNJ18B7U540 433 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 CAPN15O75808 1086 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 ADCY5O95622 1261 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 CXCL8P10145 99 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 ZNF18P17022 549 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 RFC2P35250 354 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 PSMC2P35998 433 aaKnown RBP16.48■□□□□ 0.23
CCDC140-201ENST00000295226 SPAG1Q07617 926 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 MYBPC2Q14324 1141 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 ENOX2Q16206 610 aaKnown RBP16.48■□□□□ 0.23
CCDC140-201ENST00000295226 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC140-201ENST00000295226 CCDC127Q96BQ5 260 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 CCDC51Q96ER9 411 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 BORCS6Q96GS4 357 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
CCDC140-201ENST00000295226 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
CCDC140-201ENST00000295226 PARP2Q9UGN5 583 aa16.48■□□□□ 0.23
CCDC140-201ENST00000295226 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
CCDC140-201ENST00000295226 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.47■□□□□ 0.23
CCDC140-201ENST00000295226 ZNF233A6NK53 670 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 C9IYK1 514 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 FGFR1OPO95684 399 aaKnown RBP16.47■□□□□ 0.23
CCDC140-201ENST00000295226 EPB41P11171 864 aaKnown RBP16.47■□□□□ 0.23
CCDC140-201ENST00000295226 ATF7P17544 494 aaPredicted RBP16.47■□□□□ 0.23
CCDC140-201ENST00000295226 CDK11BP21127 795 aaKnown RBP16.47■□□□□ 0.23
CCDC140-201ENST00000295226 GRM5P41594 1212 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 DLG4P78352 724 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 TMEM130Q8N3G9 435 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 TMEM174Q8WUU8 243 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 PDE11AQ9HCR9 933 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
CCDC140-201ENST00000295226 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 CEP290O15078 2479 aa16.47■□□□□ 0.23
CCDC140-201ENST00000295226 A0A0U1RQF3 1178 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 GOLGA6L6A8MZA4 724 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 ZNF500O60304 480 aaPredicted RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 RECQL4O94761 1208 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 LDHAP00338 332 aaKnown RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 CLTAP09496 248 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 TRIM49P0CI25 452 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 TRIM49CP0CI26 452 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 FPGSQ05932 587 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 SLC10A6Q3KNW5 377 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 TCP11X2Q5H9J9 407 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 LMBRD2Q68DH5 695 aaPredicted RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 CNKSR3Q6P9H4 555 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 OTOP2Q7RTS6 562 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 ECHDC2Q86YB7 292 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 APBB2Q92870 758 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 ACAP3Q96P50 834 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 FTHL17Q9BXU8 183 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 RPF1Q9H9Y2 349 aaKnown RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 IL23AQ9NPF7 189 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 TAB2Q9NYJ8 693 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 MAGEC2Q9UBF1 373 aaPredicted RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 LACTBL1A8MY62 500 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 KIAA0391O15091 583 aaKnown RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 SLC16A3O15427 465 aaKnown RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 MTIF2P46199 727 aaKnown RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 IKBKEQ14164 716 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 KRT31Q15323 416 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 ZNF365Q70YC5 407 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 SLC24A5Q71RS6 500 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 TMCO2Q7Z6W1 182 aaPredicted RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 RPUSD2Q8IZ73 545 aaKnown RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 MFSD14AQ96MC6 490 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 MMRN2Q9H8L6 949 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 KIAA1586Q9HCI6 787 aa16.46■□□□□ 0.23
CCDC140-201ENST00000295226 TOPORSQ9NS56 1045 aaPredicted RBP16.46■□□□□ 0.23
CCDC140-201ENST00000295226 ARMCX3Q9UH62 379 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms