RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 RGS17Q9UGC6 210 aaPredicted RBP21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 COQ4Q9Y3A0 265 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 HNRNPDLO14979 420 aaKnown RBP21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 MTA2O94776 668 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 CTNNA2P26232 953 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 RPL21P46778 160 aaKnown RBP21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 LIG3P49916 1009 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 CDR2Q01850 454 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 MKRN4PQ13434 485 aaPredicted RBP21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 UBAP2Q5T6F2 1119 aaKnown RBP21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 CCDC137Q6PK04 289 aaKnown RBP21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 SAMD7Q7Z3H4 446 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 VSIG10LQ86VR7 867 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 SLC17A8Q8NDX2 589 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 GRHL1Q9NZI5 618 aa21.43■■□□□ 1.02
SCUBE1-201ENST00000290460 RGS20O76081 388 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 CYP1A2P05177 515 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 CHRNA3P32297 505 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 CYP24A1Q07973 514 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 NBPF12Q5TAG4 269 aaPredicted RBP21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 LMBRD2Q68DH5 695 aaPredicted RBP21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 SWSAP1Q6NVH7 229 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 PACS2Q86VP3 889 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 ARFGAP2Q8N6H7 521 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 DDX1Q92499 740 aaKnown RBP21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 MFSD14AQ96MC6 490 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 WNT8AQ9H1J5 351 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 PTPN22Q9Y2R2 807 aa21.42■■□□□ 1.02
SCUBE1-201ENST00000290460 KRT5P13647 590 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 CCND2P30279 289 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 TNFAIP1Q13829 316 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 SNRNP48Q6IEG0 339 aaKnown RBP21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 TADA2BQ86TJ2 420 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 FAM213AQ9BRX8 229 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 RASAL2Q9UJF2 1139 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 GTF3C4Q9UKN8 822 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 RLFQ13129 1914 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 STBD1O95210 358 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 KCNJ1P48048 391 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 PPP2R2AP63151 447 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 SLC20A2Q08357 652 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 CLUL1Q15846 466 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 AGBL2Q5U5Z8 902 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 PPM1EQ8WY54 764 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 KIFAP3Q92845 792 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 ZKSCAN4Q969J2 545 aaPredicted RBP21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 FBXL18Q96ME1 805 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 XPNPEP1Q9NQW7 623 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 SEPT9Q9UHD8 586 aaPredicted RBP21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 PCYOX1Q9UHG3 505 aa21.41■■□□□ 1.02
SCUBE1-201ENST00000290460 GRIN3BO60391 1043 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 KCNA2P16389 499 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 PMS2P54278 862 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 MCCD1P59942 119 aaPredicted RBP21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 TAS1R3Q7RTX0 852 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 PHLDB2Q86SQ0 1253 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 CCDC60Q8IWA6 550 aaPredicted RBP21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 MICALL1Q8N3F8 863 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 JDP2Q8WYK2 163 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 BICD1Q96G01 975 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 NTPCRQ9BSD7 190 aaKnown RBP21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 VPS33BQ9H267 617 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 A0A087WUV0 522 aaPredicted RBP21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 CAND2O75155 1236 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 ERLIN2O94905 339 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 PRAMEF18Q5VWM3 479 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 POTEAQ6S8J7 498 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 OTUD6AQ7L8S5 288 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 SLC13A5Q86YT5 568 aaPredicted RBP21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 TMC2Q8TDI7 906 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 SPIRE2Q8WWL2 714 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 RNF25Q96BH1 459 aaPredicted RBP21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 HVCN1Q96D96 273 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 TRIM7Q9C029 511 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 PCDHA3Q9Y5H8 950 aa21.4■■□□□ 1.02
SCUBE1-201ENST00000290460 RARAP10276 462 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 HSPA6P17066 643 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 C2CD6Q53TS8 623 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 B4GALNT4Q76KP1 1039 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 CCDC105Q8IYK2 499 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 GPD1LQ8N335 351 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 SAMD3Q8N6K7 520 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 GPRASP2Q96D09 838 aa21.39■■□□□ 1.02
SCUBE1-201ENST00000290460 DOCK1Q14185 1865 aa21.39■■□□□ 1.01
SCUBE1-201ENST00000290460 FAM107AO95990 144 aa21.39■■□□□ 1.01
SCUBE1-201ENST00000290460 SIX1Q15475 284 aaPredicted RBP21.39■■□□□ 1.01
SCUBE1-201ENST00000290460 UHMK1Q8TAS1 419 aaKnown RBP21.39■■□□□ 1.01
SCUBE1-201ENST00000290460 PABPC3Q9H361 631 aaKnown RBP21.39■■□□□ 1.01
SCUBE1-201ENST00000290460 HACL1Q9UJ83 578 aa21.39■■□□□ 1.01
SCUBE1-201ENST00000290460 SMIM23A6NLE4 172 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 HMGCS2P54868 508 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 DRG2P55039 364 aaKnown RBP21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 WNT7BP56706 349 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 BACE1P56817 501 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 PRKCEQ02156 737 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 ACAD10Q6JQN1 1059 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 LLGL2Q6P1M3 1020 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 ZNF516Q92618 1163 aa21.38■■□□□ 1.01
SCUBE1-201ENST00000290460 ATP6V0A1Q93050 837 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms