RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 VPS13AQ96RL7 3174 aa10.52□□□□□ -0.73
HMHB1-201ENST00000289448 ZMYM2Q9UBW7 1377 aa10.52□□□□□ -0.73
HMHB1-201ENST00000289448 USP34Q70CQ2 3546 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 MYO15AQ9UKN7 3530 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 DMDP11532 3685 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 CASTOR2A6NHX0 329 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 LAD1O00515 517 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 ASGR2P07307 311 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 SPATA31D3P0C874 917 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 RPL17P18621 184 aaKnown RBP10.51□□□□□ -0.73
HMHB1-201ENST00000289448 NPTX2P47972 431 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 EFNA5P52803 228 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 PEX3P56589 373 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 SIGLEC14Q08ET2 396 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 TUSC3Q13454 348 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 HSP90AA2PQ14568 343 aaPredicted RBP10.51□□□□□ -0.73
HMHB1-201ENST00000289448 PPP2R5AQ15172 486 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 TMEM132AQ24JP5 1023 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 RILPL1Q5EBL4 403 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 RTP2Q5QGT7 225 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 IER5LQ5T953 404 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 KRT79Q5XKE5 535 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 RINT1Q6NUQ1 792 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 SPATA31D4Q6ZUB0 917 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 KREMEN2Q8NCW0 462 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 HASPINQ8TF76 798 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 IFT74Q96LB3 600 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 MFSD14AQ96MC6 490 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 PLIN2Q99541 437 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 RAB34Q9BZG1 259 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 SFXN1Q9H9B4 322 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 MAN1C1Q9NR34 630 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 LIMD1Q9UGP4 676 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 ADAM28Q9UKQ2 775 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 GDAQ9Y2T3 454 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 NR2E1Q9Y466 385 aa10.51□□□□□ -0.73
HMHB1-201ENST00000289448 CCDC169A6NNP5 214 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 K7ERI5 159 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 NR1I2O75469 434 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 TADA2AO75478 443 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 RFPL2O75678 378 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 KIF4AO95239 1232 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 BRD1O95696 1058 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 GLUD1P00367 558 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 PDGFBP01127 241 aaPredicted RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 THP07101 528 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 ADH1AP07327 375 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 ZRSR1Q15695 479 aaKnown RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 USP41Q3LFD5 358 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 HYIQ5T013 277 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 ATF7IP2Q5U623 682 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 LILRA6Q6PI73 481 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 PRSS55Q6UWB4 352 aaPredicted RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 CD300LGQ6UXG3 332 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 PALB2Q86YC2 1186 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 GLYCTKQ8IVS8 523 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 ZDHHC14Q8IZN3 488 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 CEP120Q8N960 986 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 CMASQ8NFW8 434 aaPredicted RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 RIN2Q8WYP3 895 aaPredicted RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 ZNF707Q96C28 371 aaPredicted RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 ACO2Q99798 780 aaKnown RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 PTPRHQ9HD43 1115 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 ARHGAP28Q9P2N2 729 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 SSX2IPQ9Y2D8 614 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
HMHB1-201ENST00000289448 TDRD15B5MCY1 1934 aaKnown RBP10.5□□□□□ -0.73
HMHB1-201ENST00000289448 NPHP3-ACAD11A0A0J9YXS1 232 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 CCDC195A0A1B0GUA6 201 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 VWA3AA6NCI4 1184 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 H3BQV1 296 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 ABLIM1O14639 778 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 SLC16A4O15374 487 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 MEFVO15553 781 aaPredicted RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 TGM5O43548 720 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 N4BP1O75113 896 aaKnown RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 VCPP55072 806 aaKnown RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 DCAF4L1Q3SXM0 396 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 GLRA4Q5JXX5 417 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 C15orf39Q6ZRI6 1047 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 ZBTB33Q86T24 672 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 TDRD5Q8NAT2 981 aaKnown RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 LRRC15Q8TF66 581 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 PPP1R10Q96QC0 940 aaKnown RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 ADPGKQ9BRR6 497 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 TARS2Q9BW92 718 aaKnown RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 CDT1Q9H211 546 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 TMEM134Q9H6X4 195 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
HMHB1-201ENST00000289448 FNIP2Q9P278 1114 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 SMC3Q9UQE7 1217 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 TNFSF13BQ9Y275 285 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 USTQ9Y2C2 406 aa10.49□□□□□ -0.73
HMHB1-201ENST00000289448 SMIM28A0A1B0GU29 152 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms