RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CEP120Q8N960 986 aa27.54■■■□□ 2
PDF-201ENST00000288022 ATXN2LQ8WWM7 1075 aaKnown RBP27.54■■■□□ 2
PDF-201ENST00000288022 TNMDQ9H2S6 317 aa27.54■■■□□ 2
PDF-201ENST00000288022 HNRNPDLO14979 420 aaKnown RBP27.53■■■□□ 2
PDF-201ENST00000288022 CLDN3O15551 220 aa27.53■■■□□ 2
PDF-201ENST00000288022 ABCD1P33897 745 aa27.53■■■□□ 2
PDF-201ENST00000288022 MRPS5P82675 430 aaKnown RBP27.53■■■□□ 2
PDF-201ENST00000288022 AMPD3Q01432 767 aa27.53■■■□□ 2
PDF-201ENST00000288022 DSC1Q08554 894 aa27.53■■■□□ 2
PDF-201ENST00000288022 HYAL1Q12794 435 aa27.53■■■□□ 2
PDF-201ENST00000288022 NOLC1Q14978 699 aaKnown RBP eCLIP27.53■■■□□ 2
PDF-201ENST00000288022 BCL7CQ8WUZ0 217 aaPredicted RBP27.53■■■□□ 2
PDF-201ENST00000288022 SCAND2PQ9GZW5 306 aaPredicted RBP27.53■■■□□ 2
PDF-201ENST00000288022 UBE2ZQ9H832 354 aaPredicted RBP27.53■■■□□ 2
PDF-201ENST00000288022 MRPL44Q9H9J2 332 aaKnown RBP27.53■■■□□ 2
PDF-201ENST00000288022 TBC1D7Q9P0N9 293 aa27.53■■■□□ 2
PDF-201ENST00000288022 SEL1LQ9UBV2 794 aa27.53■■■□□ 2
PDF-201ENST00000288022 ABLIM1O14639 778 aa27.52■■■□□ 2
PDF-201ENST00000288022 FSCN2O14926 492 aa27.52■■■□□ 2
PDF-201ENST00000288022 THP07101 528 aa27.52■■■□□ 2
PDF-201ENST00000288022 NRIP1P48552 1158 aa27.52■■■□□ 2
PDF-201ENST00000288022 BMS1Q14692 1282 aaKnown RBP27.52■■■□□ 2
PDF-201ENST00000288022 AAK1Q2M2I8 961 aa27.52■■■□□ 2
PDF-201ENST00000288022 TPRNQ4KMQ1 711 aa27.52■■■□□ 2
PDF-201ENST00000288022 ZC2HC1CQ53FD0 456 aaPredicted RBP27.52■■■□□ 2
PDF-201ENST00000288022 HERC4Q5GLZ8 1057 aaPredicted RBP27.52■■■□□ 2
PDF-201ENST00000288022 VPS52Q8N1B4 723 aa27.52■■■□□ 2
PDF-201ENST00000288022 KCNN1Q92952 543 aa27.52■■■□□ 2
PDF-201ENST00000288022 FIZ1Q96SL8 496 aa27.52■■■□□ 2
PDF-201ENST00000288022 TLE6Q9H808 572 aa27.52■■■□□ 2
PDF-201ENST00000288022 NGRNQ9NPE2 291 aaKnown RBP27.52■■■□□ 2
PDF-201ENST00000288022 TOPORSQ9NS56 1045 aaPredicted RBP27.52■■■□□ 2
PDF-201ENST00000288022 PANK4Q9NVE7 773 aa27.52■■■□□ 2
PDF-201ENST00000288022 KBTBD4Q9NVX7 518 aa27.52■■■□□ 2
PDF-201ENST00000288022 CLDND1Q9NY35 253 aa27.52■■■□□ 2
PDF-201ENST00000288022 KCNH3Q9ULD8 1083 aa27.52■■■□□ 2
PDF-201ENST00000288022 PTGESO14684 152 aa27.51■■□□□ 1.99
PDF-201ENST00000288022 NCK2O43639 380 aa27.51■■□□□ 1.99
PDF-201ENST00000288022 GTF2F1P35269 517 aaKnown RBP eCLIP27.51■■□□□ 1.99
PDF-201ENST00000288022 GTF2BQ00403 316 aa27.51■■□□□ 1.99
PDF-201ENST00000288022 DDX53Q86TM3 631 aaKnown RBP27.51■■□□□ 1.99
PDF-201ENST00000288022 CCDC65Q8IXS2 484 aa27.51■■□□□ 1.99
PDF-201ENST00000288022 PABPC5Q96DU9 382 aaKnown RBP27.51■■□□□ 1.99
PDF-201ENST00000288022 PYM1Q9BRP8 204 aaKnown RBP27.51■■□□□ 1.99
PDF-201ENST00000288022 CXCL16Q9H2A7 254 aa27.51■■□□□ 1.99
PDF-201ENST00000288022 MAGEF1Q9HAY2 307 aa27.51■■□□□ 1.99
PDF-201ENST00000288022 KCNA5P22460 613 aa27.5■■□□□ 1.99
PDF-201ENST00000288022 SMC1AQ14683 1233 aaKnown RBP27.5■■□□□ 1.99
PDF-201ENST00000288022 ADALQ6DHV7 355 aa27.5■■□□□ 1.99
PDF-201ENST00000288022 ZNF720Q7Z2F6 126 aa27.5■■□□□ 1.99
PDF-201ENST00000288022 ACAP3Q96P50 834 aa27.5■■□□□ 1.99
PDF-201ENST00000288022 ASB2Q96Q27 587 aa27.5■■□□□ 1.99
PDF-201ENST00000288022 COLEC11Q9BWP8 271 aa27.5■■□□□ 1.99
PDF-201ENST00000288022 ST6GALNAC4Q9H4F1 302 aa27.5■■□□□ 1.99
PDF-201ENST00000288022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.49■■□□□ 1.99
PDF-201ENST00000288022 PER2O15055 1255 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 ASIC1P78348 528 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 MCL1Q07820 350 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 TUSC3Q13454 348 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 SEZ6Q53EL9 994 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 GLRA4Q5JXX5 417 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 MAP4K3Q8IVH8 894 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 RABGGTAQ92696 567 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 TRIM9Q9C026 710 aa27.49■■□□□ 1.99
PDF-201ENST00000288022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.48■■□□□ 1.99
PDF-201ENST00000288022 A0A1B0GVL5 298 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 CASTOR2A6NHX0 329 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 GCNT3O95395 438 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 PIGRP01833 764 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 CMA1P23946 247 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 CEP57L1Q8IYX8 460 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 HVCN1Q96D96 273 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 ZBP1Q9H171 429 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 GDPD2Q9HCC8 539 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 OLFML3Q9NRN5 406 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 MARCH5Q9NX47 278 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 CACNG4Q9UBN1 327 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 STK39Q9UEW8 545 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 REV3LO60673 3130 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 MYO7AQ13402 2215 aa27.48■■□□□ 1.99
PDF-201ENST00000288022 FRMD3A2A2Y4 597 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 HIDE1A8MVS5 230 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 LINC01565O15544 149 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 CXCL14O95715 111 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 PFKFB1P16118 471 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 TJAP1Q5JTD0 557 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 TMEM87AQ8NBN3 555 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 VN1R3Q9BXE9 311 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 HAPLN2Q9GZV7 340 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 TCHHQ07283 1943 aa27.47■■□□□ 1.99
PDF-201ENST00000288022 PRUNE2Q8WUY3 3088 aa27.46■■□□□ 1.99
PDF-201ENST00000288022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.46■■□□□ 1.99
PDF-201ENST00000288022 F8W810 466 aa27.46■■□□□ 1.99
PDF-201ENST00000288022 AFMP43652 599 aa27.46■■□□□ 1.99
PDF-201ENST00000288022 KCNQ1P51787 676 aa27.46■■□□□ 1.99
PDF-201ENST00000288022 COASYQ13057 564 aa27.46■■□□□ 1.99
PDF-201ENST00000288022 COL19A1Q14993 1142 aa27.46■■□□□ 1.99
PDF-201ENST00000288022 EFHBQ8N7U6 833 aa27.46■■□□□ 1.99
PDF-201ENST00000288022 MRPL43Q8N983 215 aaKnown RBP27.46■■□□□ 1.99
PDF-201ENST00000288022 AUTS2Q8WXX7 1259 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms