RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TRIM59Q8IWR1 403 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 TACO1Q9BSH4 297 aaKnown RBP19.65■□□□□ 0.74
PCDH1-201ENST00000287008 TMEM60Q9H2L4 133 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 HSPA8P11142 646 aaKnown RBP19.65■□□□□ 0.74
PCDH1-201ENST00000287008 TCF7P36402 384 aaPredicted RBP19.65■□□□□ 0.74
PCDH1-201ENST00000287008 FMO5P49326 533 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 OCRLQ01968 901 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 AP1B1Q10567 949 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 NBPF9Q3BBW0 867 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 FRA10AC1Q70Z53 315 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 ZNF512Q96ME7 567 aaPredicted RBP19.65■□□□□ 0.74
PCDH1-201ENST00000287008 PPP2R3BQ9Y5P8 575 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 CAPN7Q9Y6W3 813 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 PITPNM2Q9BZ72 1349 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 NOTUMQ6P988 496 aa19.64■□□□□ 0.74
PCDH1-201ENST00000287008 HVCN1Q96D96 273 aa19.64■□□□□ 0.74
PCDH1-201ENST00000287008 ACTR2P61160 394 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 NBPF12Q5TAG4 269 aaPredicted RBP19.64■□□□□ 0.73
PCDH1-201ENST00000287008 ATG16L1Q676U5 607 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 PID1Q7Z2X4 250 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 TARS2Q9BW92 718 aaKnown RBP19.64■□□□□ 0.73
PCDH1-201ENST00000287008 ZDHHC9Q9Y397 364 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 PDGFRBP09619 1106 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 NNTQ13423 1086 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 DCP1BQ8IZD4 617 aaKnown RBP19.64■□□□□ 0.73
PCDH1-201ENST00000287008 COPEO14579 308 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 STK33Q9BYT3 514 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 EPS15L1Q9UBC2 864 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 G3BP2Q9UN86 482 aaKnown RBP19.64■□□□□ 0.73
PCDH1-201ENST00000287008 PPME1Q9Y570 386 aa19.64■□□□□ 0.73
PCDH1-201ENST00000287008 TFRCP02786 760 aaKnown RBP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 PDGFRAP16234 1089 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 CYP11B2P19099 503 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 OR1G1P47890 313 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 TRPV6Q9H1D0 765 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 OLA1Q9NTK5 396 aaKnown RBP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 ADGRG1Q9Y653 693 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 DDNO94850 711 aaPredicted RBP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 CYP2C19P33261 490 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 ROR1Q01973 937 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 MUM1Q2TAK8 710 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 FAM83AQ86UY5 434 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 MED15Q96RN5 788 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 EHD4Q9H223 541 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 TMX2Q9Y320 296 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 PPP1R12AO14974 1030 aaPredicted RBP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 CHRNA3P32297 505 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 FXR2P51116 673 aaKnown RBP eCLIP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 MRPS25P82663 173 aaKnown RBP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 YWHAHQ04917 246 aaPredicted RBP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 USP49Q70CQ1 688 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 RMDN1Q96DB5 314 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 NT5C1AQ9BXI3 368 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 C17orf75Q9HAS0 396 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 PLEKHA5Q9HAU0 1116 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 ZC3H4Q9UPT8 1303 aaKnown RBP19.63■□□□□ 0.73
PCDH1-201ENST00000287008 SNX2O60749 519 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 RTN2O75298 545 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 CLTAP09496 248 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 TPI1P60174 286 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 TRPC7Q9HCX4 862 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 PPP1R9AQ9ULJ8 1098 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 CAPN11Q9UMQ6 739 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 MEGF6O75095 1541 aa19.63■□□□□ 0.73
PCDH1-201ENST00000287008 TTC36A6NLP5 189 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 ZNF189O75820 626 aaPredicted RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 RGS7P49802 495 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 RBBP8NLQ8NC74 664 aaPredicted RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 PPWD1Q96BP3 646 aaKnown RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 DIP2BQ9P265 1576 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 GOLGA8MH3BSY2 632 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 SV2CQ496J9 727 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 ZC2HC1CQ53FD0 456 aaPredicted RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 MKNK1Q9BUB5 465 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 MST1RQ04912 1400 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 SSTR3P32745 418 aaPredicted RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 GPS1Q13098 491 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 SARS2Q9NP81 518 aaKnown RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 HSPA4LO95757 839 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 MYBP10242 640 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 SNRPFP62306 86 aaKnown RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 DCAF4L1Q3SXM0 396 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 ULK4Q96C45 1275 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 POLR3CQ9BUI4 534 aaPredicted RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 RTFDC1Q9BY42 306 aaPredicted RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 VPS11Q9H270 941 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 Q9H521 79 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 SUN2Q9UH99 717 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 FAN1Q9Y2M0 1017 aa19.62■□□□□ 0.73
PCDH1-201ENST00000287008 PRG3Q9Y2Y8 225 aaPredicted RBP19.62■□□□□ 0.73
PCDH1-201ENST00000287008 E5RI56 91 aa19.61■□□□□ 0.73
PCDH1-201ENST00000287008 SRGAP2O75044 1071 aa19.61■□□□□ 0.73
PCDH1-201ENST00000287008 DPYDQ12882 1025 aa19.61■□□□□ 0.73
PCDH1-201ENST00000287008 TTC8Q8TAM2 541 aa19.61■□□□□ 0.73
PCDH1-201ENST00000287008 DDX47Q9H0S4 455 aaKnown RBP19.61■□□□□ 0.73
PCDH1-201ENST00000287008 LIMA1Q9UHB6 759 aaKnown RBP19.61■□□□□ 0.73
PCDH1-201ENST00000287008 MAD2L2Q9UI95 211 aa19.61■□□□□ 0.73
PCDH1-201ENST00000287008 DCDC2CA8MYV0 355 aa19.61■□□□□ 0.73
PCDH1-201ENST00000287008 FGFR2P21802 821 aa19.61■□□□□ 0.73
PCDH1-201ENST00000287008 ST8SIA6P61647 398 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms