RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 DDX47Q9H0S4 455 aaKnown RBP3.98□□□□□ -1.77
RAB3C-201ENST00000282878 KMT5AQ9NQR1 393 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 MTRF1LQ9UGC7 380 aaKnown RBP3.98□□□□□ -1.77
RAB3C-201ENST00000282878 DNAJC12Q9UKB3 198 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 ZNRF3Q9ULT6 936 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 MAFBQ9Y5Q3 323 aaPredicted RBP3.98□□□□□ -1.77
RAB3C-201ENST00000282878 MRFAP1Q9Y605 127 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 AP1M2Q9Y6Q5 423 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 ARHGEF35A5YM69 484 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 H7C1D1 291 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 CTIFO43310 598 aaKnown RBP3.98□□□□□ -1.77
RAB3C-201ENST00000282878 KRT38O76015 456 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 SGPL1O95470 568 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 TUBA1BP68363 451 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 CLUL1Q15846 466 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 OLFML1Q6UWY5 402 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 TUBA1AQ71U36 451 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 VSIG1Q86XK7 387 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 INTS2Q9H0H0 1204 aaKnown RBP3.98□□□□□ -1.77
RAB3C-201ENST00000282878 CD2APQ9Y5K6 639 aa3.98□□□□□ -1.77
RAB3C-201ENST00000282878 MAP2P11137 1827 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 IGSF9BQ9UPX0 1349 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 CNTNAP1P78357 1384 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 KDM1AO60341 852 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 EDN1P05305 212 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 CD58P19256 250 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 PPP1R15BQ5SWA1 713 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 DNAJC14Q6Y2X3 702 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FAM186BQ8IYM0 893 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 PRPF31Q8WWY3 499 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 UPF1Q92900 1129 aaKnown RBP eCLIP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 HEMGNQ9BXL5 484 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 MRPL9Q9BYD2 267 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 EDEM3Q9BZQ6 932 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 IMPACTQ9P2X3 320 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 SIK3Q9Y2K2 1263 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 IGLV3-22A0A075B6J6 115 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 HCRTO43612 131 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 PIAS1O75925 651 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 ADRB2P07550 413 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FAM153BP0C7A2 387 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 SNHG28P0DPA3 235 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 STAT2P52630 851 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 LY6KQ17RY6 165 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 Q3C1V9 767 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FAM153CQ494X1 144 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 HP1BP3Q5SSJ5 553 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 CCDC50Q8IVM0 306 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 DAGLBQ8NCG7 672 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 DIS3LQ8TF46 1054 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 GTF3C2Q8WUA4 911 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FAM163AQ96GL9 167 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 ASB16Q96NS5 453 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 PDCD2LQ9BRP1 358 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 METTL5Q9NRN9 209 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FAM153AQ9UHL3 310 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 PFDN2Q9UHV9 154 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 UMODL1Q5DID0 1318 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 AHDC1Q5TGY3 1603 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 SGK1O00141 431 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 AGRPO00253 132 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 CASQ2O14958 399 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 TSPAN6O43657 245 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 SNX2O60749 519 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 NOL3O60936 208 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 MYZAPP0CAP1 466 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 AMPD3Q01432 767 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 LONRF1Q17RB8 773 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 INO80DQ53TQ3 878 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 NT5DC1Q5TFE4 455 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 TATDN1Q6P1N9 297 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 GATAD2AQ86YP4 633 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 POMGNT1Q8WZA1 660 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FAM213AQ9BRX8 229 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 IFIH1Q9BYX4 1025 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FHDC1Q9C0D6 1143 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 CXCL16Q9H2A7 254 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 ELAC1Q9H777 363 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 RBM12Q9NTZ6 932 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 SPATS2LQ9NUQ6 558 aaKnown RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 LMO7Q8WWI1 1683 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 KIF1AQ12756 1690 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 FAM25EA8MYX2 175 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 KCNK3O14649 394 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 CYP26A1O43174 497 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 TADA3O75528 432 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 STAM2O75886 525 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 PAMP19021 973 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 VAMP1P23763 118 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 MCM3P25205 808 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 HOXD13P35453 343 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 ATP1A2P50993 1020 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 EML3Q32P44 896 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 ARHGEF16Q5VV41 709 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 SRLQ86TD4 932 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 HAUS1Q96CS2 278 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.97□□□□□ -1.77
RAB3C-201ENST00000282878 CCSER1Q9C0I3 900 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 THAP9Q9H5L6 903 aa3.97□□□□□ -1.77
RAB3C-201ENST00000282878 KRT84Q9NSB2 600 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms