RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 DHX34Q14147 1143 aaKnown RBP7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 PSMD6Q15008 389 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 SPDYCQ5MJ68 293 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 EFCAB13Q8IY85 973 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 UBL4BQ8N7F7 174 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 IPO4Q8TEX9 1081 aaKnown RBP7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 LRRC45Q96CN5 670 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 IFT74Q96LB3 600 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 POLR3FQ9H1D9 316 aaPredicted RBP7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 WNT8AQ9H1J5 351 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 GPRC5DQ9NZD1 345 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 CTTNBP2NLQ9P2B4 639 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 UVRAGQ9P2Y5 699 aa7.8□□□□□ -1.16
SPARCL1-201ENST00000282470 GOLGA6L10A0A0M3HER8 536 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 FAM187AA6NFU0 413 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 H0YGN5 161 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 TTI1O43156 1089 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 MMEP08473 750 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 CTNNA1P35221 906 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 SP2Q02086 613 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 EMC2Q15006 297 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 STXBP2Q15833 593 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ATP8B4Q8TF62 1192 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PSPC1Q8WXF1 523 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 CCDC127Q96BQ5 260 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 CEP89Q96ST8 783 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 POP1Q99575 1024 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 RAB17Q9H0T7 212 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PORCNQ9H237 461 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 NEUROG2Q9H2A3 272 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 DHX33Q9H6R0 707 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 TOPORSQ9NS56 1045 aaPredicted RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 GGA3Q9NZ52 723 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 UTP11Q9Y3A2 253 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 NR2E1Q9Y466 385 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 NFS1Q9Y697 457 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 KRT14P02533 472 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 OATP04181 439 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ATP4AP20648 1035 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 EDNRBP24530 442 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 HSD17B3P37058 310 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 NAMPTP43490 491 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 DRG2P55039 364 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 MTMR3Q13615 1198 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 HLTFQ14527 1009 aaKnown RBP eCLIP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 UAP1Q16222 522 aaPredicted RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 DUPD1Q68J44 220 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 KDM7AQ6ZMT4 941 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ZNF677Q86XU0 584 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 DHX38Q92620 1227 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 NIFKQ9BYG3 293 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 TXLNGYQ9BZA5 131 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PLEKHA4Q9H4M7 779 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 FZD1Q9UP38 647 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 GRIN2DO15399 1336 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 HMGB1P1B2RPK0 211 aaPredicted RBP7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 DAPK3O43293 454 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PHF2O75151 1096 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PPFIA4O75335 1185 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ARL2P36404 184 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 USP8P40818 1118 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 IRAK1P51617 712 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 CYP1B1Q16678 543 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 CLEC16AQ2KHT3 1053 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ZACNQ401N2 412 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PRAMEF18Q5VWM3 479 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ACAD10Q6JQN1 1059 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 LBX2Q6XYB7 198 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 TMC3Q7Z5M5 1100 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 GPC2Q8N158 579 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ZNF516Q92618 1163 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ATP6V1G3Q96LB4 118 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 FAM213AQ9BRX8 229 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ERVK-5Q9HDB9 667 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 ZNF302Q9NR11 478 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PCYOX1Q9UHG3 505 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PLAAQ9Y263 795 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 PCDHA3Q9Y5H8 950 aa7.79□□□□□ -1.16
SPARCL1-201ENST00000282470 COMTP21964 271 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 CHRNA3P32297 505 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 RFC5P40937 340 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 POLGP54098 1239 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 HIRAP54198 1017 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 DR1Q01658 176 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 TRMT1LQ7Z2T5 733 aaKnown RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 DDX42Q86XP3 938 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 RIOX2Q8IUF8 465 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ZNF564Q8TBZ8 553 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ZNF526Q8TF50 670 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 BBXQ8WY36 941 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 KRT35Q92764 455 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ERP44Q9BS26 406 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 NUP85Q9BW27 656 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 CAPS2Q9BXY5 557 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 CELF4Q9BZC1 486 aaKnown RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 AVENQ9NQS1 362 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 ZDHHC18Q9NUE0 388 aa7.78□□□□□ -1.16
SPARCL1-201ENST00000282470 FBXO40Q9UH90 709 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms