RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 VSTM1Q6UX27 236 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 PPP4R3CPQ6ZMV5 832 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 EPM2AIP1Q7L775 607 aaPredicted RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 BTBD6Q96KE9 485 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 P2RX7Q99572 595 aaKnown RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 SSC5DA1L4H1 1573 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 PHF2O75151 1096 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 PDE6CP51160 858 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 ZC2HC1CQ53FD0 456 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 SPDYCQ5MJ68 293 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 CCDC137Q6PK04 289 aaKnown RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 MIGA2Q7L4E1 593 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 BORCS6Q96GS4 357 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 PWWP2AQ96N64 755 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 INTUQ9ULD6 942 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 RAD21O60216 631 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 PECAM1P16284 738 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 MSH2P43246 934 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 DHX34Q14147 1143 aaKnown RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 CTTNQ14247 550 aaKnown RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 TNFAIP8L3Q5GJ75 292 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 ARHGEF2Q92974 986 aaKnown RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 SYT11Q9BT88 431 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 NSRP1Q9H0G5 558 aaKnown RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 CPSF2Q9P2I0 782 aaKnown RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 NKX1-2Q9UD57 310 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 TGFB1I1O43294 461 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 NMT1P30419 496 aaKnown RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 SHMT1P34896 483 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 RAB27AP51159 221 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 GLIS2Q9BZE0 524 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-201ENST00000281142 HOMER3Q9NSC5 361 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 FZD1Q9UP38 647 aa12.17□□□□□ -0.46
SCLT1-201ENST00000281142 MPHOSPH10O00566 681 aaKnown RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 PYGMP11217 842 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 CHKAP35790 457 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 RPS6KA3P51812 740 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 SNAP25P60880 206 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 UTP4Q969X6 686 aaKnown RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 CDC42EP4Q9H3Q1 356 aaKnown RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 ZMYND8Q9ULU4 1186 aaPredicted RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 PNMA6FA0A0J9YX94 578 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 PDXKO00764 312 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 TNFAIP3P21580 790 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 SMARCA1P28370 1054 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 SSR1P43307 286 aaKnown RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 MESDQ14696 234 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 PRR16Q569H4 304 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 TRIM68Q6AZZ1 485 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 CCDC105Q8IYK2 499 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 BHMT2Q9H2M3 363 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 ACP6Q9NPH0 428 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 AAASQ9NRG9 546 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 TYW1Q9NV66 732 aaKnown RBP12.16□□□□□ -0.46
SCLT1-201ENST00000281142 CTTNBP2NLQ9P2B4 639 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 TBK1Q9UHD2 729 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 RASAL2Q9UJF2 1139 aa12.16□□□□□ -0.46
SCLT1-201ENST00000281142 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-201ENST00000281142 ZBTB39O15060 712 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 SPIRE1Q08AE8 756 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 SPATA21Q7Z572 469 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 PRUNE1Q86TP1 453 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 ITFG2Q969R8 447 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 IRAK4Q9NWZ3 460 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.46
SCLT1-201ENST00000281142 CORO1CQ9ULV4 474 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-201ENST00000281142 PPP2R3BQ9Y5P8 575 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 GREB1LQ9C091 1923 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-201ENST00000281142 ZMYM2Q9UBW7 1377 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-201ENST00000281142 TP73O15350 636 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 MAP3K13O43283 966 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 SUN1O94901 812 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 COMTP21964 271 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 CCND1P24385 295 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 CYP2J2P51589 502 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 TRIP13Q15645 432 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-201ENST00000281142 FAM47EQ6ZV65 393 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 ASRGL1Q7L266 308 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 TMEM237Q96Q45 408 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms