RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 EPHB4P54760 987 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 POU5F1Q01860 360 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 HSP90AA2PQ14568 343 aaPredicted RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 SNRNP35Q16560 246 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 TPD52L1Q16890 204 aaPredicted RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 SEZ6Q53EL9 994 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 CEP135Q66GS9 1140 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 LUZP1Q86V48 1076 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 ECHDC2Q86YB7 292 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 IRF2BP1Q8IU81 584 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 CBWD2Q8IUF1 395 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 TMEM192Q8IY95 271 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 NOC3LQ8WTT2 800 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 LBHD1Q9BQE6 289 aaPredicted RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 THAP9Q9H5L6 903 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 FRMD4BQ9Y2L6 1034 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 SLC16A3O15427 465 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 ADRB2P07550 413 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 CLTAP09496 248 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 PSMC2P35998 433 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 ZNF598Q86UK7 904 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 BORCS6Q96GS4 357 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 SAMSN1Q9NSI8 373 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 FANCLQ9NW38 375 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 SNTG2Q9NY99 539 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 ZNF233A6NK53 670 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 BECN2A8MW95 431 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 MEFVO15553 781 aaPredicted RBP18.73■□□□□ 0.59
SKP2-201ENST00000274254 EFCAB14O75071 495 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 BAIAP3O94812 1187 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 GNA14O95837 355 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 MARSP56192 900 aaKnown RBP18.73■□□□□ 0.59
SKP2-201ENST00000274254 OSTNP61366 133 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 ENOX2Q16206 610 aaKnown RBP18.73■□□□□ 0.59
SKP2-201ENST00000274254 TMEM240Q5SV17 173 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 CDKAL1Q5VV42 579 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 CRIPAKQ8N1N5 446 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 RDH13Q8NBN7 331 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 ACAP3Q96P50 834 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 CCDC94Q9BW85 323 aaPredicted RBP18.73■□□□□ 0.59
SKP2-201ENST00000274254 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
SKP2-201ENST00000274254 ELAC1Q9H777 363 aaKnown RBP18.73■□□□□ 0.59
SKP2-201ENST00000274254 CITO14578 2027 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 RECQL4O94761 1208 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 EOMESO95936 686 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 EPB41P11171 864 aaKnown RBP18.72■□□□□ 0.59
SKP2-201ENST00000274254 ACTN1P12814 892 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 ZNF18P17022 549 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 MCCD1P59942 119 aaPredicted RBP18.72■□□□□ 0.59
SKP2-201ENST00000274254 SLC10A6Q3KNW5 377 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 PSRC1Q6PGN9 363 aaPredicted RBP18.72■□□□□ 0.59
SKP2-201ENST00000274254 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 BRSK2Q8IWQ3 736 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 FAM186BQ8IYM0 893 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 HACE1Q8IYU2 909 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 MFSD14AQ96MC6 490 aa18.72■□□□□ 0.59
SKP2-201ENST00000274254 MEIS3P2A8K0S8 358 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 FGBP02675 491 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 CXCL8P10145 99 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 AKAP5P24588 427 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 CYP24A1Q07973 514 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.71■□□□□ 0.59
SKP2-201ENST00000274254 AGMOQ6ZNB7 445 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 FRMD5Q7Z6J6 570 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 RNF214Q8ND24 703 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 PGBD4Q96DM1 585 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.71■□□□□ 0.592e-6■■■■□ 19.8
SKP2-201ENST00000274254 RPF1Q9H9Y2 349 aaKnown RBP18.71■□□□□ 0.59
SKP2-201ENST00000274254 TMEM161AQ9NX61 479 aa18.71■□□□□ 0.59
SKP2-201ENST00000274254 RBAKQ9NYW8 714 aaPredicted RBP18.71■□□□□ 0.59
SKP2-201ENST00000274254 TTC26A0AVF1 554 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 ITGA4P13612 1032 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 MAGEA10P43363 369 aaPredicted RBP18.7■□□□□ 0.58
SKP2-201ENST00000274254 WNT7BP56706 349 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 ENPEPQ07075 957 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 ALKAL1Q6UXT8 129 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 INTS8Q75QN2 995 aaKnown RBP18.7■□□□□ 0.58
SKP2-201ENST00000274254 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 FAM114A1Q8IWE2 563 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 LPPQ93052 612 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 SNX27Q96L92 541 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 CNOT6LQ96LI5 555 aaKnown RBP18.7■□□□□ 0.58
SKP2-201ENST00000274254 APOL6Q9BWW8 343 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 RBSNQ9H1K0 784 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 PLEKHA5Q9HAU0 1116 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 METTL14Q9HCE5 456 aaKnown RBP18.7■□□□□ 0.58
SKP2-201ENST00000274254 TOPORSQ9NS56 1045 aaPredicted RBP18.7■□□□□ 0.58
SKP2-201ENST00000274254 GIT1Q9Y2X7 761 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 PDE4DIPQ5VU43 2346 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 ANK1P16157 1881 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 TRIP11Q15643 1979 aa18.7■□□□□ 0.58
SKP2-201ENST00000274254 YARSP54577 528 aaKnown RBP18.69■□□□□ 0.58
SKP2-201ENST00000274254 WDR5P61964 334 aaKnown RBP18.69■□□□□ 0.58
SKP2-201ENST00000274254 PSMD6Q15008 389 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 HSP90AA4PQ58FG1 418 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 XKR4Q5GH76 650 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 PLEKHO2Q8TD55 490 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 HERVK_113Q902F9 699 aa18.69■□□□□ 0.58
SKP2-201ENST00000274254 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms