RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TUBP50607 506 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 BFSP1Q12934 665 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 GRAPQ13588 217 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 GPATCH4Q5T3I0 446 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 SLFN13Q68D06 897 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 SLC5A5Q92911 643 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 SPATS2LQ9NUQ6 558 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 PCDHAC2Q9Y5I4 1007 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 DDX60LQ5H9U9 1706 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 AP1G2O75843 785 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 GDF11O95390 407 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 CFBP00751 764 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 BCRP11274 1271 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 GRIK3Q13003 919 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 LONP2Q86WA8 852 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 TAB3Q8N5C8 712 aaPredicted RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 FBF1Q8TES7 1133 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 NUDCD1Q96RS6 583 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 WRAP73Q9P2S5 460 aaPredicted RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 NARFQ9UHQ1 456 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 R3HDM2Q9Y2K5 976 aaKnown RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 GTPBP10A4D1E9 387 aaKnown RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 DPPA5A6NC42 116 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 O00370 1275 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 GJB6O95452 261 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 EYA4O95677 639 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 TTC4O95801 387 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 LINGO3P0C6S8 592 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 ANXA13P27216 316 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 ASRGL1Q7L266 308 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 CBWD1Q9BRT8 395 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 SPDYE5A6NIY4 337 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 SLITRK3O94933 977 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 UNC5CO95185 931 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 TAC1P20366 129 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 CTCFP49711 727 aaPredicted RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 RWDD2BP57060 319 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 SIX1Q15475 284 aaPredicted RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 ZNF720Q7Z2F6 126 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 GBP7Q8N8V2 638 aaPredicted RBP13.8□□□□□ -0.2
COL8A1-202ENST00000273342 KLHL11Q9NVR0 708 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 NINJ2Q9NZG7 142 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 GGA1Q9UJY5 639 aa13.8□□□□□ -0.2
COL8A1-202ENST00000273342 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 LGR5O75473 907 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 GABPAQ06546 454 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 TNFAIP8L3Q5GJ75 292 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 FAM182AQ5T1J6 154 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 MFSD5Q6N075 450 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 RFX8Q6ZV50 586 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 SERPINB12Q96P63 405 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 ZCWPW1Q9H0M4 648 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 C12orf65Q9H3J6 166 aaKnown RBP13.79□□□□□ -0.2
COL8A1-202ENST00000273342 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
COL8A1-202ENST00000273342 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
COL8A1-202ENST00000273342 POLLQ9UGP5 575 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 K7ENM7 598 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 HOXA7P31268 230 aaPredicted RBP13.79□□□□□ -0.2
COL8A1-202ENST00000273342 WDR4P57081 412 aaKnown RBP13.79□□□□□ -0.2
COL8A1-202ENST00000273342 KIF22Q14807 665 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 SETDB1Q15047 1291 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 TRMT10CQ7L0Y3 403 aaKnown RBP13.79□□□□□ -0.2
COL8A1-202ENST00000273342 PIDD1Q9HB75 910 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL8A1-202ENST00000273342 DCTN4Q9UJW0 460 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 VAV3Q9UKW4 847 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 FRMPD4Q14CM0 1322 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 DOT1LQ8TEK3 1739 aa13.79□□□□□ -0.2
COL8A1-202ENST00000273342 ATF2P15336 505 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 RRM1P23921 792 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
COL8A1-202ENST00000273342 BLMHQ13867 455 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 BMT2Q1RMZ1 405 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
COL8A1-202ENST00000273342 ARHGEF18Q6ZSZ5 1173 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 PPP1R12CQ9BZL4 782 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
COL8A1-202ENST00000273342 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
COL8A1-202ENST00000273342 PRKAG3Q9UGI9 489 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 CHKBQ9Y259 395 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 SMIM24O75264 130 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 ALAS1P13196 640 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 KRT15P19012 456 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 OVGP1Q12889 678 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 C11orf63Q6NUN7 778 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 C1orf186Q6ZWK4 172 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 GSTA5Q7RTV2 222 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 CROCCP2Q86T23 111 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms