RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RCN2Q14257 317 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 STXBP2Q15833 593 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 FAM153CQ494X1 144 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 XKR9Q5GH70 373 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 FAM160B1Q5W0V3 765 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 MIS18BP1Q6P0N0 1132 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 SFR1Q86XK3 245 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 KIF2BQ8N4N8 673 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 MTMR8Q96EF0 704 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 TUBB6Q9BUF5 446 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 MAF1Q9H063 256 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 DDX20Q9UHI6 824 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 FAM153AQ9UHL3 310 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 EYA4O95677 639 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 PSAPP07602 524 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 CYP3A4P08684 503 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 ESRRAP11474 423 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 VCAM1P19320 739 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 RPA1P27694 616 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 MFAP3P55082 362 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 KNOP1Q1ED39 458 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 TTMPQ5BVD1 217 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 EPM2AIP1Q7L775 607 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 RSAD2Q8WXG1 361 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 MXRA8Q9BRK3 442 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 FBXO28Q9NVF7 368 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 INTUQ9ULD6 942 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 USH1CQ9Y6N9 552 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 MEA1Q16626 185 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 SH3RF1Q7Z6J0 888 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 RPUSD2Q8IZ73 545 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 SLC25A27O95847 323 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 UCHL3P15374 230 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 EPHX2P34913 555 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 DRAP1Q14919 205 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 TAB3Q8N5C8 712 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 GRAMD1AQ96CP6 724 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 TLR10Q9BXR5 811 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 KCND2Q9NZV8 630 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 MYPNQ86TC9 1320 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 ACTN1P12814 892 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 GALCP54803 685 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 SEPT14Q6ZU15 432 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 DPH6Q7L8W6 267 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 SYN2Q92777 582 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 ZKSCAN4Q969J2 545 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 EIF2AK1Q9BQI3 630 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 SPC25Q9HBM1 224 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 C1orf112Q9NSG2 853 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 FGFR1OP2Q9NVK5 253 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 DBR1Q9UK59 544 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 CYP3A7-CYP3A51PA0A087WV96 503 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 IGF2BP3O00425 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 CXCL11O14625 94 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 GYG2O15488 501 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 SLC37A4O43826 429 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 PFDN1O60925 122 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 ANP32DO95626 131 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 TNNI1P19237 187 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 CYP3A7P24462 503 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 CIITAP33076 1130 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 GPC5P78333 572 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 PTK2Q05397 1052 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 KLHDC7AQ5VTJ3 777 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 SLC30A9Q6PML9 568 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 LRRC34Q8IZ02 419 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 AGBL1Q96MI9 1066 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 NT5C1BQ96P26 610 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 ERP44Q9BS26 406 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 PFASO15067 1338 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 CHD4Q14839 1912 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 CPP00450 1065 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 SLC29A2Q14542 456 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 ANKRD20A8PQ5CZ79 823 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 YTHDF3Q7Z739 585 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 FUKQ8N0W3 1084 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 RDM1Q8NG50 284 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 ATG4CQ96DT6 458 aa12.29□□□□□ -0.44
CLSTN3-201ENST00000266546 SETSIPP0DME0 302 aa12.28□□□□□ -0.44
CLSTN3-201ENST00000266546 DLATP10515 647 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-201ENST00000266546 PTPRAP18433 802 aa12.28□□□□□ -0.44
CLSTN3-201ENST00000266546 NLGN2Q8NFZ4 835 aa12.28□□□□□ -0.44
CLSTN3-201ENST00000266546 PCIF1Q9H4Z3 704 aa12.28□□□□□ -0.44
CLSTN3-201ENST00000266546 ATP6V0A4Q9HBG4 840 aa12.28□□□□□ -0.44
CLSTN3-201ENST00000266546 MYH1P12882 1939 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms