RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 C2orf71A6NGG8 1288 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 SGK1O00141 431 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 KRT4P19013 534 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 KLRC3Q07444 240 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 GRM4Q14833 912 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 CLUL1Q15846 466 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 P3H1Q32P28 736 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 SMC1BQ8NDV3 1235 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 TRAF3IP3Q9Y228 551 aa17.32■□□□□ 0.36
GPC1-201ENST00000264039 ATP6V1G1O75348 118 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 MTFR1Q15390 333 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 C11orf91Q3C1V1 193 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 PALB2Q86YC2 1186 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 SLC13A5Q86YT5 568 aaPredicted RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 ITFG2Q969R8 447 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 MPP4Q96JB8 637 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 ROPN1BQ9BZX4 212 aaPredicted RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 ROPN1Q9HAT0 212 aaPredicted RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 IGSF9BQ9UPX0 1349 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 USP1O94782 785 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 TTC4O95801 387 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 ACADSP16219 412 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 PTPN4P29074 926 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 ALDH18A1P54886 795 aaKnown RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 MED21Q13503 144 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 CPNE8Q86YQ8 564 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 CYP4X1Q8N118 509 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 LRRC57Q8N9N7 239 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 KLHL23Q8NBE8 558 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 SLC5A5Q92911 643 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 DNAJC1Q96KC8 554 aaKnown RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 FBXO6Q9NRD1 293 aaPredicted RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 RPTORQ8N122 1335 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 MMEL1Q495T6 779 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 DAB2IPQ5VWQ8 1189 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 GRK7Q8WTQ7 553 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 CEP95Q96GE4 821 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 REEP2Q9BRK0 252 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 RIOK1Q9BRS2 568 aaKnown RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
GPC1-201ENST00000264039 PREBQ9HCU5 417 aa17.31■□□□□ 0.36
GPC1-201ENST00000264039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.36
GPC1-201ENST00000264039 MYH7BA7E2Y1 1941 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 CYP26A1O43174 497 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 BTNL9Q6UXG8 535 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 PIGBQ92521 554 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 LZTS2Q9BRK4 669 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 RABGAP1Q9Y3P9 1069 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 TMEM253P0C7T8 217 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 POTEJP0CG39 1038 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 CD58P19256 250 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 PDIA2Q13087 525 aaKnown RBP17.3■□□□□ 0.36
GPC1-201ENST00000264039 TTBK2Q6IQ55 1244 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 NME8Q8N427 588 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 RIBC1Q8N443 379 aaPredicted RBP17.3■□□□□ 0.36
GPC1-201ENST00000264039 ATP8B4Q8TF62 1192 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 WDR35Q9P2L0 1181 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 WASF2Q9Y6W5 498 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 MT-ND3P03897 115 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
GPC1-201ENST00000264039 SLC34A1Q06495 639 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 GPS1Q13098 491 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 TRIP10Q15642 601 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 PKN2Q16513 984 aaKnown RBP17.3■□□□□ 0.36
GPC1-201ENST00000264039 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 TBC1D16Q8TBP0 767 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 CCDC110Q8TBZ0 833 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 MTBPQ96DY7 904 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 AGPAT1Q99943 283 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 INTS2Q9H0H0 1204 aaKnown RBP17.3■□□□□ 0.36
GPC1-201ENST00000264039 PDP2Q9P2J9 529 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 CHKBQ9Y259 395 aa17.3■□□□□ 0.36
GPC1-201ENST00000264039 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 MAP3K13O43283 966 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 LDHCP07864 332 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 GSTA2P09210 222 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 KLRK1P26718 216 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 TTC27Q6P3X3 843 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.29■□□□□ 0.36
GPC1-201ENST00000264039 ZSWIM1Q9BR11 485 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 GANQ9H2C0 597 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 DHX36Q9H2U1 1008 aaKnown RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 CHST7Q9NS84 486 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 FOXN2P32314 431 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 MAGEA4P43358 317 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 MPP2Q14168 576 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 LNX1Q8TBB1 728 aaPredicted RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 SLC13A1Q9BZW2 595 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 MMADHCQ9H3L0 296 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms